 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.06G107300.1.p |
| Common Name | GLYMA_06G107300, LOC100775332 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
bZIP |
| Protein Properties |
Length: 356aa MW: 39984.7 Da PI: 6.6438 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G107300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 33 | 1.3e-10 | 70 | 101 | 5 | 36 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvk 36
k rr+++NReAAr+sR+RKka++++Le
Glyma.06G107300.1.p 70 KMLRRLAQNREAARKSRLRKKAYVKQLESSRS 101
6789***********************97655 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MKMDIYEPFQ QVSLWGDNFK LDGGLNSIAS PMLMVDSTSV ENKSEDIPQE SREPSGSGAD 60
QEATNKEVNK MLRRLAQNRE AARKSRLRKK AYVKQLESSR SKLMQLELEI GKARKQGLYM 120
GTVLDAGYIG STSETINPGI VAFEIEYGQW VEEQQRRNEE LRHAFQAQAS DVQLNVVVQS 180
VLNHYSNLFR MKADAAKADV LYLLSGVWKA SVERIFLWIG GSRPSQLLNI IVPQLEPLTD 240
QQIVSISNLR LSSQQAEDAL SLGLEKLQQS LVHDMAVDSL GVGNFGLQMV LAMEKFEALE 300
GFVIQADHLR QQTLLHMSRI LSTHQAARGL LALGEYFHRL RTLCSLWYAR PYDLA*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in the whole plant. {ECO:0000269|PubMed:8003690, ECO:0000269|PubMed:8628224}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid-inducible and mediated by NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. {ECO:0000269|PubMed:12897257}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Gangadharan A,Sreerekha MV,Whitehill J,Ham JH,Mackey D
The Pseudomonas syringae pv. tomato type III effector HopM1 suppresses Arabidopsis defenses independent of suppressing salicylic acid signaling and of targeting AtMIN7.
PLoS ONE, 2013. 8(12): p. e82032
[PMID:24324742] - Herrera-Vásquez A, et al.
Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
Plant Mol. Biol. Rep., 2018.
[PMID:26696694] - Fang H, et al.
The Ca2+ /calmodulin2-binding transcription factor TGA3 elevates LCD expression and H2 S production to bolster Cr6+ tolerance in Arabidopsis.
Plant J., 2017. 91(6): p. 1038-1050
[PMID:28670772] - Sarkar S, et al.
Interaction of Arabidopsis TGA3 and WRKY53 transcription factors on Cestrum yellow leaf curling virus (CmYLCV) promoter mediates salicylic acid-dependent gene expression in planta.
Planta, 2018. 247(1): p. 181-199
[PMID:28913593]
|
