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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.06G079800.2.p |
| Common Name | bZIP62, GLYMA_06G079800 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
bZIP |
| Protein Properties |
Length: 253aa MW: 27727.7 Da PI: 6.8696 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G079800.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 42.9 | 1e-13 | 85 | 136 | 3 | 54 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
+ kr rrk +NR +ArrsR+RK+a++ Le v++L+ eN +L k+ ++
Glyma.06G079800.2.p 85 DMKRLRRKVSNRDSARRSRRRKQAQLSDLELQVEKLKVENATLYKQFTDASQ 136
68*****************************************987665555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MTSFSACGLI DPLCSQNLTP KHSTITATID SQSSICATSN VGSPVSANKP EGRENHTKGA 60
TSGSSEPSDE DDEAGACEQS TNPADMKRLR RKVSNRDSAR RSRRRKQAQL SDLELQVEKL 120
KVENATLYKQ FTDASQHFRE ADTNNRVLKS DVEALRAKVK LAEDMVTRSS FTTLNNQLLQ 180
TQHHQMSTPQ QLNTTNLRRM AHVSPTITVH GNDVSYNNGG QNSALGNLDM SFNDINEVMN 240
DAMSCGTIWP LD*
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 89 | 105 | RRKVSNRDSARRSRRRK |
| 2 | 99 | 106 | RRSRRRKQ |
| 3 | 101 | 106 | SRRRKQ |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Present in silique vasculature and funiculi. In the anthers, restricted to the connective tissue at pre- and post-dehiscence stages and detected in the vascular tissue of the stamen filament. {ECO:0000269|PubMed:18841482}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, stems, young leaves, and flowers, mostly in vascular tissues (e.g. phloem). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:18841482}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. {ECO:0000250}. |
| Function -- GeneRIF ? help
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- negative regulator of abscisic acid signaling and functions in salt and freezing tolerance
[PMID: 18365246]
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| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
| Publications
? help Back to Top |
- Liao Y, et al.
Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
Planta, 2008. 228(2): p. 225-40
[PMID:18365246] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ortiz-Espín A, et al.
Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
J. Exp. Bot., 2017. 68(5): p. 1025-1038
[PMID:28184497] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Pedrotti L, et al.
Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
Plant Cell, 2018. 30(2): p. 495-509
[PMID:29348240]
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