PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G048500.1.p
Common NameGLYMA_06G048500, LOC102661984
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 145aa    MW: 16499.7 Da    PI: 8.7523
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G048500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.7e-1158105451
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                           ++ rr+q+NRe+ArrsR RKk+ ie+L+     L  +N+ Lk++l +
  Glyma.06G048500.1.p  58 ERKLRRMQSNRESARRSRYRKKQHIENLTSQLNRLRIQNRLLKNQLAS 105
                          5789***********************************999966544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-1053111No hitNo description
SMARTSM003382.9E-1255126IPR004827Basic-leucine zipper domain
PfamPF077164.2E-956104IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.36957104IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-1159113No hitNo description
CDDcd147029.79E-1760109No hitNo description
PROSITE patternPS0003606277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MFFHQDEAVQ YPCTPVHETM LTESEIEDLF SLINHSTDPA SPGSGSQGSN RVVYSPEERK  60
LRRMQSNRES ARRSRYRKKQ HIENLTSQLN RLRIQNRLLK NQLASTMHQN LLLSLHNDHL  120
KSESVALMAT LSDLCGILGT MLSH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G048500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014632411.11e-103basic leucine zipper 4
RefseqXP_028234281.11e-103basic leucine zipper 4-like
TrEMBLA0A0B2SEE31e-102A0A0B2SEE3_GLYSO; Basic leucine zipper 4
TrEMBLK7KT531e-102K7KT53_SOYBN; Uncharacterized protein
STRINGGLYMA06G05111.11e-102(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Representative plantOGRP1173246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-09basic leucine-zipper 44