PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G180300.1.p
Common NameGLYMA_05G180300, LOC100800288
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family EIL
Protein Properties Length: 463aa    MW: 53133.8 Da    PI: 4.8782
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G180300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN33942.1e-120253462353
                          XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 
                           lkkrm kd++ll+++ke++ +     e+ +g   +++ +e++rrkkmsraQD+iLkYM+k+mevcnaqGfvYgi+pekgkpv+g+sdsL
  Glyma.05G180300.1.p  25 QLKKRMQKDRILLQQMKEKRPK-----EE-AG---QQEKQEASRRKKMSRAQDSILKYMVKIMEVCNAQGFVYGIVPEKGKPVTGSSDSL 105
                          69************88888886.....33.22...23569************************************************** PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHH CS
                 EIN3  92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelww 181
                          r+WWkekv+fd+n+p ai+ky +   +l+  ++l  ++ss+ h l++lqDTtl+SLLsalmqhc ppqrrfple+g++pPWWP G e ww
  Glyma.05G180300.1.p 106 REWWKEKVKFDQNAPGAIAKYMP---LLET-DEL--DPSSYIHLLNDLQDTTLSSLLSALMQHCIPPQRRFPLERGLAPPWWPRGAENWW 189
                          *********************44...5554.444..59**************************************************** PP

                          HHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXX CS
                 EIN3 182 gelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkq 270
                          ge+g l++++g+ppykkphdlkkawkvs+L+a ikhmsp+++++r+l+ qsk lqdkm+a++++++++v+nqee +++            
  Glyma.05G180300.1.p 190 GEQGfLAHEHGPPPYKKPHDLKKAWKVSLLAAIIKHMSPNLDKLRRLVTQSKTLQDKMTARDTATWSKVMNQEETLLQ----------LA 269
                          ****9999999**************************************************************98662..........35 PP

                          XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
                 EIN3 271 spkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                          ++ + +s +++ed ++ + s   ++   ++  g ++++krk+   +  +v +k   + cq  q+++s t ++f +kns+ ++e
  Glyma.05G180300.1.p 270 NKCLRISPSSEEDENECESST--ASTIIHE--GGNIIEKRKSDLFDLDAVVDK--LYACQYYQCPQSLTGMGFLNKNSRMNHE 346
                          666777777776655444444..3445554..99************9999999..8***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.5E-11425263No hitNo description
Gene3DG3DSA:1.10.3180.102.5E-64139267IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.94E-56141266IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0071281Biological Processcellular response to iron ion
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MVEIHEEIDP FDQEEHEEEE TDYDQLKKRM QKDRILLQQM KEKRPKEEAG QQEKQEASRR  60
KKMSRAQDSI LKYMVKIMEV CNAQGFVYGI VPEKGKPVTG SSDSLREWWK EKVKFDQNAP  120
GAIAKYMPLL ETDELDPSSY IHLLNDLQDT TLSSLLSALM QHCIPPQRRF PLERGLAPPW  180
WPRGAENWWG EQGFLAHEHG PPPYKKPHDL KKAWKVSLLA AIIKHMSPNL DKLRRLVTQS  240
KTLQDKMTAR DTATWSKVMN QEETLLQLAN KCLRISPSSE EDENECESST ASTIIHEGGN  300
IIEKRKSDLF DLDAVVDKLY ACQYYQCPQS LTGMGFLNKN SRMNHESLCA YRTNESQSVL  360
LQDSQSNDTQ IASVDDWMMN LEAARANQNE NNHPVGHPIN DQFRDIAGKT SEEDYGCLWP  420
KSLEDLDLQA ALNQMDMDLN PNPEQDTPQG QEVTSIWDLP YK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A3e-551392651126Protein ETHYLENE INSENSITIVE 3
4zds_B3e-551392651126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G180300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003525064.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-133EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLI1K4L00.0I1K4L0_SOYBN; Uncharacterized protein
STRINGGLYMA05G31410.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-110EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]