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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.05G070200.2.p |
Common Name | GLYMA_05G070200, LOC100820385 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ARR-B |
Protein Properties |
Length: 521aa MW: 58569.2 Da PI: 6.7634 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.05G070200.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 87.4 | 1.3e-27 | 333 | 386 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
+++WtpeLH+ Fv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++
Glyma.05G070200.2.p 333 IKVDWTPELHKTFVKAVEQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 386
5899****************.********************************96 PP
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2 | Response_reg | 22.9 | 4.2e-09 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedal 87
vl+ + +++ + +r le +y +v ++ + eal + +++ ++ ++ + G+++l ++++ +lp i+ + + +++
Glyma.05G070200.2.p 20 VLLLERDNISAAEIRAKLEAMDY-NVSTFCEENEALSAISSGLesFHIAIVEVSSSSgQGGFKFL---ENAK-DLPTIMTSNNHCLNTMM 104
567777788888899999*****.***************76654599999987776645566655...4555.899**9999999***** PP
HHHHTTESEEEESS--HHHHHH CS
Response_reg 88 ealkaGakdflsKpfdpeelvk 109
+++ +Ga +fl Kp ++++l++
Glyma.05G070200.2.p 105 KCIALGAVEFLRKPLSEDKLRN 126
*******************987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 521 aa
Download sequence Send
to blast |
MVFSANDLQE WKDFPKGLKV LLLERDNISA AEIRAKLEAM DYNVSTFCEE NEALSAISSG 60 LESFHIAIVE VSSSSGQGGF KFLENAKDLP TIMTSNNHCL NTMMKCIALG AVEFLRKPLS 120 EDKLRNIWQH VVHKAFNARA SILSESLKPV KESVVSMLQL QTDDEQHESR VSRDIEKVSR 180 FVDNDHELSS GNDKYPAPST PQLRQGTRLL DDGDCQEQTN CSTGKESGEH EGESKSVETT 240 CGNLNAESTP QQRKSEITLV REEVESTPQQ RKSEITLVKE EVDIVDASKG ESVASPHTQK 300 RKVLSNTDRN TKALIKVGVH SDSCEIRGNQ KKIKVDWTPE LHKTFVKAVE QLGIDQAIPS 360 RILELMKVEG LTRHNVASHL QKYRMHKRQI LPKEERKWLN LRERSYCVKR PIMAFPPYHS 420 NHTLPLPPVY PMWGQSGSPT AGMQIWGSPG YPFWHTTAEN WHWKPFPGMH ADAWGCPVLP 480 LPPPQTPGFP YSQNMPSLLN ADAVDHTFTM PQSSFEHYPA *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-106 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |