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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.04G168300.1.p |
| Common Name | GLYMA_04G168300, LOC100803454 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
Dof |
| Protein Properties |
Length: 471aa MW: 51645.1 Da PI: 6.8296 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.04G168300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.7 | 1.5e-39 | 124 | 184 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
++k+l+cprC+s++tkfCyynny+++qPryfCkaC+ryWt+GG++rnvPvG+grrknk+s
Glyma.04G168300.1.p 124 PDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 184
7899******************************************************976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MQENKDPAIK LFGQKIAFPG EADSQAIAGG ETDWPPAMDV DKDEEDFGIG NPDKDEKDKD 60
PRAEKVSEKT KEADPPPDAA DSKTSEGIQN PNTPSIDEES AKSKNDKSEN DQQENNNNKT 120
LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRYFCKACQR YWTAGGTMRN VPVGAGRRKN 180
KNSASHYRHI TISEALQAAR IDAPNGTHLL KQNGRVLSFG LDPPICDSMA SILNLTAEKK 240
GTLNNNTRNG FHTIEDQRNK DNHNNNNNNG DDCSSASSIT VSNEESGKST SQESIMVPNS 300
NGFIHQVPCI STLPWPYPFP SAAPAMCPPG FPMSFYPAAF WNIPWFPSQH SHHSAPTPRS 360
PSSGPNSPTL GKHSRVVAEK QDHLQEESPS RQRNGSVLVP KTLRIDDPSE AAKSSIWATL 420
GIKNECVTGG GMFKGFQSKK DEKDHVVEAS PVLRANPAAL SRSLNFHENS *
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in the vasculature of cotyledons and hypocotyls, leaves and roots. {ECO:0000269|PubMed:19619493}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Regulates a photoperiodic flowering response. Transcriptional repressor of 'CONSTANS' expression. {ECO:0000250, ECO:0000269|PubMed:19619493}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian-regulation. Highly expressed at the beginning of the light period, then decreases, reaching a minimum between 16 and 29 hours after dawn before rising again at the end of the day. {ECO:0000269|PubMed:19619493}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Corrales AR, et al.
Multifaceted role of cycling DOF factor 3 (CDF3) in the regulation of flowering time and abiotic stress responses in Arabidopsis.
Plant Cell Environ., 2017. 40(5): p. 748-764
[PMID:28044345] - Renau-Morata B, et al.
Ectopic Expression of CDF3 Genes in Tomato Enhances Biomass Production and Yield under Salinity Stress Conditions.
Front Plant Sci, 2017. 8: p. 660
[PMID:28515731] - Henriques R, et al.
The antiphasic regulatory module comprising CDF5 and its antisense RNA FLORE links the circadian clock to photoperiodic flowering.
New Phytol., 2017. 216(3): p. 854-867
[PMID:28758689]
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