PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.04G124200.1.p
Common NameGLYMA_04G124200, LOC100784924
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 317aa    MW: 34904.9 Da    PI: 8.7526
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.04G124200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.59.3e-16246297557
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                          +r++r++kNRe+A rsR+RK+a++ eLe kv  Le+eN++L+ + +el+k+ +
  Glyma.04G124200.1.p 246 RRQKRMIKNRESAARSRARKQAYTTELEHKVSRLEEENEKLR-RQQELEKMLS 297
                          79****************************************.8899999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-16236296No hitNo description
SMARTSM003382.2E-11242298IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.542244289IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.75E-11246291No hitNo description
CDDcd147072.09E-24246295No hitNo description
PfamPF001702.7E-13246295IPR004827Basic-leucine zipper domain
PROSITE patternPS000360249264IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MGSQGGGDNN GKHSQLQPLV RQNSMYSLTL DEVQNHLGDL GKPLSSMNLD ELLKNVWTVE  60
ANQSTGVDIE GTAQTRQAAL QRQASLSLTS ALSGKTVDEV WRDIQQSKDN KDKKSQERQS  120
TLGEMTLEDF LVNAGVVAEA STRKNTGATI GVDSNVVAPQ FPQHGPWIQY PQPQYQHPQQ  180
GLMGIYIAGQ NIAQPLHMGA GAASDVPYAD GQVALSSPVM GTLSDTRRPG RNGGTPEDMI  240
EKTVERRQKR MIKNRESAAR SRARKQAYTT ELEHKVSRLE EENEKLRRQQ ELEKMLSSAP  300
PPEPRYQIRR TSSASF*
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.04G124200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0964760.0BT096476.1 Soybean clone JCVI-FLGm-15H3 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003523905.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_028228673.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES38e-91AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0B2SEX50.0A0A0B2SEX5_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLK7KJP70.0K7KJP7_SOYBN; Uncharacterized protein
STRINGGLYMA04G14840.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-78ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]