PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.04G026200.1.p
Common NameGLYMA_04G026200, LOC100779731
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 514aa    MW: 56676.6 Da    PI: 6.6866
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.04G026200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.3e-11341399563
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          kr++r   NR +A rs +RK  +i+eLe kv++L++e ++L  +  +l+   + lkse+
  Glyma.04G026200.1.p 341 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTETTTLSTQFTKLQRDNSDLKSEN 399
                          9********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-17337401IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978339402IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-12341397No hitNo description
PfamPF001701.7E-10341399IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.83E-11341397No hitNo description
CDDcd147039.51E-14342392No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    Send to blast
MEGVDQRNSS AFGVPVPRPP NQKSRMPPSH PSINVSPSAT PYSQYPQRLR SPGSSHSRSL  60
SQPPIFSLDS LPPLSPSPAA VTSMFDSIST TDMSVEESNV SSQVPLNRGH ALLPPRKGHR  120
RSSSDSPLGI SGFMQSSPVP SGGESSGFEK PIQLVLKASF RDSLDGGHAN EPVNGRKEEA  180
ADDLFREYMN LDNFDNLNFP GMEDKDLDSR TSGSKTVESS DNEVESHVNG KASGAQGASS  240
SCSEERREGV KRSSNGEVAP GSRHRRSFSL DSSIGNFNIE DGLPKLPPSK NQMGQHSPSN  300
SMDGKMSETS TEFGNGEFSA EEVKKIMESD KLAEIASTDP KRAKRILANR QSAARSKERK  360
MRYIAELEHK VQTLQTETTT LSTQFTKLQR DNSDLKSENN ECKLRLQAME QQSLLKDALN  420
ETLDAEVRRL RRAVAELGGE SLTSCMARQL AINQQMFELQ HQQPSQQRHF LLQNHHTQEE  480
IESRSQQIQG NELHPQAQIQ SQQIQRNELH PQP*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.222510.0leaf| root| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.04G026200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1242164e-37AC124216.27 Medicago truncatula clone mth2-34o22, complete sequence.
GenBankAC1743154e-37AC174315.4 Medicago truncatula clone mth2-165c4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003523619.10.0uncharacterized protein LOC100779731 isoform X1
TrEMBLI1JT500.0I1JT50_SOYBN; Uncharacterized protein
STRINGGLYMA04G02850.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.32e-60bZIP family protein