PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 425aa MW: 45528.4 Da PI: 8.2266

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.03G255000.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.6	2.4e-22	279	341	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L aeN +Lk+e+++l++ ++k++ e+ Glyma.03G255000.2.p 279 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVEN 341 89*********************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07777	1.5E-37	1	100	IPR012900	G-box binding protein, multifunctional mosaic region
Pfam	PF16596	1.1E-26	133	262	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.8E-17	274	338	No hit	No description
SMART	SM00338	2.6E-21	279	343	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-20	279	341	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	13.415	281	344	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.19E-10	282	337	No hit	No description
CDD	cd14702	4.38E-21	284	332	No hit	No description
PROSITE pattern	PS00036	0	286	301	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005829	Cellular Component	cytosol
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence Send to blast
MGNSEEEKST KTEKPSSPVT MDQANQTNQT NIHVYPDWAA MQAYYGPRVT MPPYYNSAVA 60 SGHAPHPYMW GPPQPMMPPY GPPYAAIYPH GGVYTHPAVP IGPLTHSQGV PSSPAAGTPL 120 SIETPPKSSG NTDQGLMKKL KEFDGLAMSI GNGHAESAER GGENRLSQSV DTEGSSDGSD 180 GNTSGANQSR RKRSREGTPT TDGEGKTEIQ GSPISKETAA SNKMLGVVPA SVAGTIVGHV 240 VSSGMTTALE LRNPSSVHSK TSAPQPCPVL PAEAWVQNER ELKRERRKQS NRESARRSRL 300 RKQAETEELA RKVESLNAEN ATLKSEINRL TESSEKMRVE NATLRGKLKN AQLGQTQEIT 360 LKIIDSQRAT PVSTENLLSR VNNSGSNDRT VEDENGFCEN KPNSGAKLHQ LLDTSPRADA 420 VAAG*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence Send to blast

MGNSEEEKST KTEKPSSPVT MDQANQTNQT NIHVYPDWAA MQAYYGPRVT MPPYYNSAVA  60
SGHAPHPYMW GPPQPMMPPY GPPYAAIYPH GGVYTHPAVP IGPLTHSQGV PSSPAAGTPL  120
SIETPPKSSG NTDQGLMKKL KEFDGLAMSI GNGHAESAER GGENRLSQSV DTEGSSDGSD  180
GNTSGANQSR RKRSREGTPT TDGEGKTEIQ GSPISKETAA SNKMLGVVPA SVAGTIVGHV  240
VSSGMTTALE LRNPSSVHSK TSAPQPCPVL PAEAWVQNER ELKRERRKQS NRESARRSRL  300
RKQAETEELA RKVESLNAEN ATLKSEINRL TESSEKMRVE NATLRGKLKN AQLGQTQEIT  360
LKIIDSQRAT PVSTENLLSR VNNSGSNDRT VEDENGFCEN KPNSGAKLHQ LLDTSPRADA  420
VAAG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	301	RRSRLRK
2	295	302	RRSRLRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.32876	0.0	cotyledon\| epicotyl\| hypocotyl\| leaf

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00318	DAP	Transfer from AT2G46270	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.03G255000.2.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031145	0.0	KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001336229.1	0.0	bZIP transcription factor bZIP77 isoform 2
Refseq	XP_028226824.1	0.0	common plant regulatory factor 1-like isoform X2
Swissprot	Q99089	1e-148	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A0B2RQK0	0.0	A0A0B2RQK0_GLYSO; Common plant regulatory factor 1
TrEMBL	K7KH19	0.0	K7KH19_SOYBN; Uncharacterized protein
STRING	GLYMA03G41590.5	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-100	G-box binding factor 3

Link Out ? help Back to Top
Phytozome	Glyma.03G255000.2.p

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]