PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 426aa MW: 45627.6 Da PI: 8.2266

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.03G255000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.6	2.4e-22	280	342	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L aeN +Lk+e+++l++ ++k++ e+ Glyma.03G255000.1.p 280 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVEN 342 89*********************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07777	3.8E-36	1	101	IPR012900	G-box binding protein, multifunctional mosaic region
Pfam	PF16596	1.1E-26	134	263	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.8E-17	275	339	No hit	No description
Pfam	PF00170	3.4E-20	280	342	IPR004827	Basic-leucine zipper domain
SMART	SM00338	2.6E-21	280	344	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	13.415	282	345	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.19E-10	283	338	No hit	No description
CDD	cd14702	2.71E-21	285	333	No hit	No description
PROSITE pattern	PS00036	0	287	302	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005829	Cellular Component	cytosol
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence Send to blast
MGNSEEEKST KTEKPSSPVT MDQANQTNQT NIHVYPDWAA MQAYYGPRVT MPPYYNSAVA 60 SGHAPHPYMW GPPQVPMMPP YGPPYAAIYP HGGVYTHPAV PIGPLTHSQG VPSSPAAGTP 120 LSIETPPKSS GNTDQGLMKK LKEFDGLAMS IGNGHAESAE RGGENRLSQS VDTEGSSDGS 180 DGNTSGANQS RRKRSREGTP TTDGEGKTEI QGSPISKETA ASNKMLGVVP ASVAGTIVGH 240 VVSSGMTTAL ELRNPSSVHS KTSAPQPCPV LPAEAWVQNE RELKRERRKQ SNRESARRSR 300 LRKQAETEEL ARKVESLNAE NATLKSEINR LTESSEKMRV ENATLRGKLK NAQLGQTQEI 360 TLKIIDSQRA TPVSTENLLS RVNNSGSNDR TVEDENGFCE NKPNSGAKLH QLLDTSPRAD 420 AVAAG*

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence Send to blast

MGNSEEEKST KTEKPSSPVT MDQANQTNQT NIHVYPDWAA MQAYYGPRVT MPPYYNSAVA  60
SGHAPHPYMW GPPQVPMMPP YGPPYAAIYP HGGVYTHPAV PIGPLTHSQG VPSSPAAGTP  120
LSIETPPKSS GNTDQGLMKK LKEFDGLAMS IGNGHAESAE RGGENRLSQS VDTEGSSDGS  180
DGNTSGANQS RRKRSREGTP TTDGEGKTEI QGSPISKETA ASNKMLGVVP ASVAGTIVGH  240
VVSSGMTTAL ELRNPSSVHS KTSAPQPCPV LPAEAWVQNE RELKRERRKQ SNRESARRSR  300
LRKQAETEEL ARKVESLNAE NATLKSEINR LTESSEKMRV ENATLRGKLK NAQLGQTQEI  360
TLKIIDSQRA TPVSTENLLS RVNNSGSNDR TVEDENGFCE NKPNSGAKLH QLLDTSPRAD  420
AVAAG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	302	RRSRLRK
2	296	303	RRSRLRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.32876	0.0	cotyledon\| epicotyl\| hypocotyl\| leaf

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00318	DAP	Transfer from AT2G46270	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.03G255000.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031145	0.0	KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001336230.1	0.0	bZIP transcription factor bZIP77 isoform 1
Refseq	XP_025983484.1	0.0	bZIP transcription factor bZIP77 isoform X1
Refseq	XP_025983485.1	0.0	bZIP transcription factor bZIP77 isoform X1
Refseq	XP_028226821.1	0.0	common plant regulatory factor 1-like isoform X1
Refseq	XP_028226822.1	0.0	common plant regulatory factor 1-like isoform X1
Refseq	XP_028226823.1	0.0	common plant regulatory factor 1-like isoform X1
Swissprot	Q99089	1e-146	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A445LHC3	0.0	A0A445LHC3_GLYSO; Uncharacterized protein
TrEMBL	I1JRX0	0.0	I1JRX0_SOYBN; Uncharacterized protein
STRING	GLYMA03G41590.5	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5301	34	55
Representative plant	OGRP4346	11	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-104	G-box binding factor 3

Link Out ? help Back to Top
Phytozome	Glyma.03G255000.1.p

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]