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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G189600.1.p |
Common Name | GLYMA_03G189600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 456aa MW: 52151 Da PI: 6.4708 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G189600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 73.4 | 3.8e-23 | 114 | 212 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsesss 77
+Wt+ +v+ Li a+ +++++ +++ +kk++W++vs m+e+g+ +sp+qC++k+++lnkryk+++++ +k+ ++++++
Glyma.03G189600.1.p 114 KWTDTMVKFLIMAVYYIGDEAGSEGtdptkkkasgllQKKGKWKSVSGGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVE 203
7**************9998888643356677889999**********************************************55999** PP
trihelix 78 tcpyfdqle 86
+ ++d ++
Glyma.03G189600.1.p 204 NQTLLDTMD 212
999999997 PP
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Protein Features
? help Back to Top |
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
Pfam | PF13837 | 1.6E-20 | 112 | 237 | No hit | No description |
Sequence ? help Back to Top |
Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MEPNALGGGI FPNISSGLLG VENPLQQQPN LQNQQNPHPL HHLQMVSYTT NHDTDTHHQQ 60 PPPQQSIKHG YNFSATKSNK SQITLSDEDE PVFTAEDNSS GDPKRKVSPW HRMKWTDTMV 120 KFLIMAVYYI GDEAGSEGTD PTKKKASGLL QKKGKWKSVS GGMMEKGYYV SPQQCEDKFN 180 DLNKRYKRVN DILGKGTACR VVENQTLLDT MDLSPKMKEE VRKLLNSKHL FFREMCAYHN 240 SCGHNNNNNC GSTSNVQQST DQPLHQHNHQ QQQCLHSSEN GVGSLRMLKE DEDEDIEDDD 300 SDEFSDEDED ESGEGGSRGM EEDENDHVMR KRARNKGGFG VSSISSQMMQ QLNGEVSGVL 360 QDGGKSAWEK KQWMKKKVVQ LEEQQVSYQM QAFEMEKQRL KWARFSSKKE REMEKDKLQN 420 ERKRLEIERM VLLLRHKELE LVNVQQQHQQ QHSST*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G10040.1 | 9e-63 | sequence-specific DNA binding transcription factors |