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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.03G143600.3.p | ||||||||
Common Name | GLYMA_03G143600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 311aa MW: 34532.9 Da PI: 6.6106 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 34 | 6.4e-11 | 239 | 263 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r+rWt++LHe+Fve+v++LGG+e Glyma.03G143600.3.p 239 KTRIRWTKDLHEKFVECVNRLGGAE 263 68*********************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.9E-8 | 237 | 263 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MNENKIDWGG LIQQSHVLSG DFNSEFGNRY CQYFDIRQAW NMGPLAMVGG EAIDNELQNI 60 GHAKSSGTIM SRFESPASAF YAAENCMEFA EYDCQVGIHS LSSQLCKIND LEFPLYQSPR 120 ENLFLDSANQ SETNFDLSNT LQSIVKSQLN SANQCSRSPE KSNKISCGNF HSTKFLPVEQ 180 QKLFIDGLIS GSSFPNKGNQ DHMLRFSSQI ERLSPTLSAG SVSTIGNSAS NVAAVVSSKT 240 RIRWTKDLHE KFVECVNRLG GAELICRNIE LLNSFQNPVT GNLTKEPTQR MCIILMSKLA 300 YKLERHLSCN * |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.24839 | 0.0 | cotyledon| root| seed coat |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.03G143600.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JN201526 | 0.0 | JN201526.1 Glycine max PHR1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001237115.2 | 0.0 | MYB-CC domain-containing transcription factor PHR8 isoform 2 | ||||
Refseq | XP_028225380.1 | 0.0 | uncharacterized protein LOC114406770 isoform X2 | ||||
TrEMBL | A0A0R0KPD4 | 0.0 | A0A0R0KPD4_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA03G29940.1 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 7e-11 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Glyma.03G143600.3.p |