PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G143500.2.p
Common NameGLYMA_03G143500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 304aa    MW: 34331.7 Da    PI: 8.1061
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G143500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like73.14e-23223274152
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                          k r++Wt++LHe F+  v++LGG+ekA Pk+il++mk + L+++hvkSHLQk
  Glyma.03G143500.2.p 223 KRRIKWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQK 274
                          689************************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-19221274IPR009057Homeodomain-like
SuperFamilySSF466892.51E-10222275IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-17223274IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MYQYSSQLYG TEWESYMGIS NLDKVVGSEQ LSFEPTKSPF NIVTTPLQIT PPGFCASAIK  60
SLVSFQAQQQ QQHAHHQHQI EVPAAWCFEF PKTTTTTDTH MVMNNICQAS GDNFTTKQDR  120
PSSQFTSSFL SSSGADCRSS SEKYCKIASY SEEKHSSIQP DSIQYYDLYS QEDDKLLRDD  180
AATDEGPLEI SFQRNQLDSC TKREKQAPHR TCGVACVASR RGKRRIKWTK DLHEPFMMIV  240
NSLGGPEKAK PKAILDMMKS DLLSISHVKS HLQKDLRKDR ELMGCLSFKS KSICKLRNHG  300
NYN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-15222274153Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G143500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006576853.10.0protein PHOSPHATE STARVATION RESPONSE 3
RefseqXP_028225378.10.0protein PHOSPHATE STARVATION RESPONSE 3-like
TrEMBLA0A0R0KJ730.0A0A0R0KJ73_SOYBN; Uncharacterized protein
STRINGGLYMA03G29935.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.23e-16G2-like family protein