PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 776aa MW: 84285.2 Da PI: 6.2542

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.03G123200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.5	6.8e-14	257	318	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ kr r+++NRe+A+ sRqRKk ++eeLeekv +L + ++ ++++ + e+a+l+++v Glyma.03G123200.1.p 257 EDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSLNSIIADMSSKMSYMVAEIATLRQQV 318 6789******************************************9999999999999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-13	256	320	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.473	258	321	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-12	259	318	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.8E-15	260	318	No hit	No description
SuperFamily	SSF57959	6.89E-11	260	318	No hit	No description
CDD	cd14704	8.85E-19	261	310	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0016021	Cellular Component	integral component of membrane
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 776 aa Download sequence Send to blast
MTESMPAVEP SPEPPASDIV FDDFSTDFSA FPIPSMDSLF NTTDGLPFPS DLEFGMDFNN 60 NNGEFEITFD DLDDIYIPSD AEDFLLPDAC NPNYASVSPP IDDSSAKNSD SDASAVSGDG 120 VSRFFNSQVS ESDSADNVRV PSVPSPEAEF CEREESSNGP VSSQGSGNGG SGVYEAMHSP 180 SPDSGPYERD ITSFHAHAAT NNGVKMEEVP AFDLKRKKGS CEGSATKHRR FSSSVENNNN 240 NKTEKQFQSD LNGIEDEDEK RKARLMRNRE SAQLSRQRKK HYVEELEEKV RSLNSIIADM 300 SSKMSYMVAE IATLRQQVGA AAGVMCPPPP PPAPGMYPHH PPMAPMPYPW MPCAPYVVKP 360 QGSQVPLVPI PRLKPQQPAS APKSKKSESK KSEGKTKKVA SISLLGLFFF IMLFGGLVPV 420 VDFRFGGLVD NVPGTGSSNY VSDRVYGHGG GKVWSLNGPR NGSGRDGDVG FSNGRFSVSD 480 RVKNYEKRGR NLREERHDRK GPDDSSRQGN ASEPLVASLY VPRNDKMVKI DGNLIIHSIM 540 ASEKAMASQT AEAKKDKRET GLAIPKDLDS ALAIPGVGRS RDQHPHVYRV SPEQRKALGS 600 GSTKALKDHM KSSATDGKMQ QWFREGLAGP MLSSGMCTEV FQFDASPSPG AIVPATSVAN 660 VSTENHQNAT SVKKTRNRRT LHELPEPLNG SSLNITEEQV KNLQKDHFHG NKSSMVVSVL 720 VDPREAGDGD VDVDGMMRPK SLSRIFVVVL IDSVKYVTYS CGLPRASPHL VTGYV*

Sequence ? help Back to Top

Protein Sequence Length: 776 aa Download sequence Send to blast

MTESMPAVEP SPEPPASDIV FDDFSTDFSA FPIPSMDSLF NTTDGLPFPS DLEFGMDFNN  60
NNGEFEITFD DLDDIYIPSD AEDFLLPDAC NPNYASVSPP IDDSSAKNSD SDASAVSGDG  120
VSRFFNSQVS ESDSADNVRV PSVPSPEAEF CEREESSNGP VSSQGSGNGG SGVYEAMHSP  180
SPDSGPYERD ITSFHAHAAT NNGVKMEEVP AFDLKRKKGS CEGSATKHRR FSSSVENNNN  240
NKTEKQFQSD LNGIEDEDEK RKARLMRNRE SAQLSRQRKK HYVEELEEKV RSLNSIIADM  300
SSKMSYMVAE IATLRQQVGA AAGVMCPPPP PPAPGMYPHH PPMAPMPYPW MPCAPYVVKP  360
QGSQVPLVPI PRLKPQQPAS APKSKKSESK KSEGKTKKVA SISLLGLFFF IMLFGGLVPV  420
VDFRFGGLVD NVPGTGSSNY VSDRVYGHGG GKVWSLNGPR NGSGRDGDVG FSNGRFSVSD  480
RVKNYEKRGR NLREERHDRK GPDDSSRQGN ASEPLVASLY VPRNDKMVKI DGNLIIHSIM  540
ASEKAMASQT AEAKKDKRET GLAIPKDLDS ALAIPGVGRS RDQHPHVYRV SPEQRKALGS  600
GSTKALKDHM KSSATDGKMQ QWFREGLAGP MLSSGMCTEV FQFDASPSPG AIVPATSVAN  660
VSTENHQNAT SVKKTRNRRT LHELPEPLNG SSLNITEEQV KNLQKDHFHG NKSSMVVSVL  720
VDPREAGDGD VDVDGMMRPK SLSRIFVVVL IDSVKYVTYS CGLPRASPHL VTGYV*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.7157	0.0	cotyledon\| hypocotyl\| leaf\| pod\| root\| seed coat\| somatic embryo\| stem\| vegetative bud

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.03G123200.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028225155.1	0.0	bZIP transcription factor 17-like
TrEMBL	A0A445LAL4	0.0	A0A445LAL4_GLYSO; BZIP transcription factor 17
STRING	GLYMA03G27865.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7487	34	48
Representative plant	OGRP2171	16	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-134	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.03G123200.1.p
Entrez Gene	100101871

Publications ? help Back to Top
Liao Y, et al. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta, 2008. 228(2): p. 225-40 [PMID:18365246]