PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.03G105000.2.p
Common NameGLYMA_03G105000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 265aa    MW: 29879.8 Da    PI: 6.6008
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.03G105000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-05200226430
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                           h ++Er+RR+++ ++f  L   +P +
  Glyma.03G105000.2.p 200 DHIMAERKRRQDLTERFIALSATIPGL 226
                          599**********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.8E-5200230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.26E-5201229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MEDSWENWIS SLEMGEDNNS NGQSHTNSLD RDKLLTGIDL EPPDFSFHQS DHHHHHTYTM  60
SYNHHHSNNN DFPTTSTMGS SSLSYDEDAS FDERHGKMLK CNSSNSINIS QDVANSHIPS  120
SSSAPSKSTF ILSFENSTVE PALHDRVPNY YNNSPNKHFE ATCSSLLSSE ITLISSDHVI  180
TKPKAKQGAK KYRTSSEIKD HIMAERKRRQ DLTERFIALS ATIPGLKKMG DKYGMTVNDL  240
VKRLRQDLLK SHDIQESHSK ECQI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204209ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.03G105000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003520396.21e-152transcription factor bHLH18 isoform X1
RefseqXP_028224968.11e-152transcription factor bHLH18-like isoform X1
TrEMBLA0A0R0KMH40.0A0A0R0KMH4_SOYBN; Uncharacterized protein
STRINGGLYMA03G25100.21e-151(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-12bHLH family protein