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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.03G018000.2.p |
Common Name | GLYMA_03G018000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
C3H |
Protein Properties |
Length: 224aa MW: 25258.8 Da PI: 8.2881 |
Description |
C3H family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.03G018000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-CCCH | 27.6 | 5.2e-09 | 11 | 33 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26
t+ C++++ G Ck+Gd+C+ H+
Glyma.03G018000.2.p 11 TSTCKYWMN-GNCKFGDQCRSLHS 33
889******.***********997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0090502 | Biological Process | RNA phosphodiester bond hydrolysis, endonucleolytic |
GO:0003676 | Molecular Function | nucleic acid binding |
GO:0004523 | Molecular Function | RNA-DNA hybrid ribonuclease activity |
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MFLHRTAPPP TSTCKYWMNG NCKFGDQCRS LHSWSDVEAT FVGTQHVFLD DNPRPTRLVW 60 WTPPPRGFFK LNCDGAFTVY GNKGAAGGVL RDWKGEFILG FSDALIECSS ALEAELWAIK 120 IGMQTVVARG YRNLIVESDS LKAIQIINAH KGDFLRSSIQ HMTRMVDRIC WNHVYRETNS 180 VADGFAKHGL SLSQDQSIRV FDSAPDFIES RLYGDRIGKI YCR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235048 | 0.0 | AC235048.1 Glycine max strain Williams 82 clone GM_WBb0045O22, complete sequence. |