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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.02G236200.1.p |
| Common Name | GLYMA_02G236200 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
bZIP |
| Protein Properties |
Length: 365aa MW: 39422.6 Da PI: 6.8089 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.02G236200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 32.7 | 1.6e-10 | 166 | 223 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l ++ + l +e
Glyma.02G236200.1.p 166 KRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTSGLSTE 223
9*****************************************9999888777666655 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MQDPSSNPNS NPNPNPHNAN AASQLPRPPQ ATASTAVAGA FSSSLFARSG GPHHRRAHSE 60
MSFRLPDDMM DLSPSDPFAG GSSTASMEEI GSEDDLFSTY IDVDKLSGAN GSGGAGNGAD 120
PTGEREKSPA RPRHRQSSSV DFGEIMDAKK AMPPDKLAEL WTIDPKRAKR ILANRQSAAR 180
SKERKARYIQ ELERKVQTLQ TEATTLSAQL TLYQRDTSGL STENTELKLR LQAMEQQAQL 240
RDALNEALKK EVERLKVATG EGMSHTESFN LGMHQMPFSG SNFIPIPPQS GPSGHQNMQM 300
PPFGHSPSTM PTHQLHQTSS HPYSEILQNE QLGRFQGLDI SSKGSTLVKS EGPSLSASES 360
SSTF*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. Strongly expressed in mature pollen. {ECO:0000269|PubMed:27896439}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins.
J. Exp. Bot., 2016. 67(19): p. 5699-5710
[PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
Plant Reprod, 2017. 30(1): p. 1-17
[PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
[PMID:9356517]
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