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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.02G217800.1.p |
Common Name | GLYMA_02G217800, LOC100818341 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 334aa MW: 38232.1 Da PI: 4.7973 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G217800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 32.6 | 1.4e-10 | 170 | 213 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL ++ Y+k+L
Glyma.02G217800.1.p 170 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILGDTIGYMKEL 213
589*********************66......***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MELQDHDFLE ELMSLRRETW DTNPCSQENQ LFSNGWSFDC FEDQNYHQAF PPNSFSCQQV 60 PQSYNNKGYN YNEIYSSLLH EFSAPQVIDS SSYNTLDTSP FLAQEDYPLS MMEEEDPGFL 120 GEELHCLDLQ TTCKMEPSHS TEMPIFNTTS SFVERKNRAK KLQGQPSKNL MAERRRRKRL 180 NDRLSMLRSI VPKISKMDRT AILGDTIGYM KELLEKINNL KQEIEVDSNM AGIFKDVKPN 240 EIIVRNSPKF DVERRNVNTR VEICCAGKPG LLLATVNTLE TLGVEIQQCV ISCFNDFTVQ 300 ASCSEELLQK TILSSEDIKQ ALFRSAGYGG RYL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 172 | 179 | ERRRRKRL |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Broadly expressed. {ECO:0000269|PubMed:17088607}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis. Development, 2016. 143(4): p. 682-90 [PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis. Plant Mol. Biol., 2017. 93(3): p. 299-311 [PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]
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