PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G203800.1.p
Common NameGLYMA_02G203800
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family WRKY
Protein Properties Length: 534aa    MW: 58341 Da    PI: 8.4646
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G203800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.92.8e-25194250259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          +DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e++++ ++v+ei+Y++eH h+
  Glyma.02G203800.1.p 194 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKK-IECCDDSGHVIEIVYKSEHSHD 250
                          7********************************98.*********************7 PP
2WRKY96.81.4e-30368424359
                          -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+
  Glyma.02G203800.1.p 368 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHD 424
                          9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-21187252IPR003657WRKY domain
PROSITE profilePS5081117.729188252IPR003657WRKY domain
SuperFamilySSF1182901.31E-20190252IPR003657WRKY domain
SMARTSM007742.1E-24193251IPR003657WRKY domain
PfamPF031068.3E-18195250IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.8E-31351426IPR003657WRKY domain
PROSITE profilePS5081131.869361426IPR003657WRKY domain
SuperFamilySSF1182904.97E-27362426IPR003657WRKY domain
SMARTSM007749.9E-35366425IPR003657WRKY domain
PfamPF031062.3E-23368423IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MDQRHGPQPL PESDTIGNDS HPKTQLTKET ERVVESLSDA ESRHRELRSS DKPCSDSNLE  60
TLGAGVTSSV ETLAVQHRSD DLQGSSTAPN SGGKAESKET VESPEKETIE RGAVQPLQTQ  120
TENRLQVSVC SIPLSDLSPT SVTQSLSIVS SPTVQKQKIS TPKVNNTHVP EVDRKNPSGR  180
KTLSAVSVAR TSASDGYNWR KYGQKQVKSP TGSRSYYRCT HSDCCAKKIE CCDDSGHVIE  240
IVYKSEHSHD PPRKTNSIRE NKFLSSSEPI VENSVPEQPV RVLKDADPSI SSKESLQEAP  300
CSNDKKRQNT SNISGNDKVI LKEEHVNEPE PKKRMKKGDL TEMDSPVKPG KKPKFVVHAA  360
GDVGISGDGY RWRKYGQKMV KGNPHPRNYY RCTSAGCPVR KHIETAVDNS DAVIITYKGV  420
HDHDMPVPKK RHGPPSAPLV AAAAPASMNS LQVKKPDSPQ NKKISTQWSV DTEGELTGEA  480
LELGVTNYHS QWQAARTTTG SNQTPPALDQ VIKWSPPPQN YIKCNLNAAG ITD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-25354426274WRKY transcription factor 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.243840.0cotyledon| hypocotyl| seed coat| stem| vegetative bud
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G203800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312280.0KT031228.1 Glycine max clone HN_CCL_111 WRKY transcription factor (Glyma02g36510.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001304481.10.0probable WRKY transcription factor 32
SwissprotP595831e-123WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A0R0L9D90.0A0A0R0L9D9_SOYBN; Uncharacterized protein
STRINGGLYMA02G36510.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Representative plantOGRP10318610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-106WRKY DNA-binding protein 32