PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 440aa MW: 48341.9 Da PI: 10.119

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.02G131700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44	4.8e-14	361	413	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ + ee+ ++ + Glyma.02G131700.1.p 361 RRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQRKQEEIMEMKK 413 79************************************988877777777654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.6E-12	357	421	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.622	359	410	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.54E-9	361	409	No hit	No description
Pfam	PF00170	1.2E-11	361	413	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.11E-26	361	415	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.7E-13	361	410	No hit	No description
PROSITE pattern	PS00036	0	364	379	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
MNFRNFGVGD NHPTWDAMHG KTPANNNVTS TTLLRQPSTI YSLTFDEFQS TMGGIGKDFG 60 SMNMDELLKN IWTAEETQAM VFSAVAAAGG VEGHNNNSNN NPINCSGLQR QGSLTLPRTL 120 SQKTVEEVWR DLIKESGGEA NDGGSGGNGG SSNPQMQATL GEMTLEEFLV RAGVVREDVP 180 QQQQNGKPND NGWFGDFPRP NNNNTSLLLG FQQPNRSNGN GNLGENTNLV SKQQPPPLSL 240 NSNHSQRQAQ HQHQHQQHPP PLFPKPANVT FAGAPTHLLN NAHQHASPGR RGGLIGVAAE 300 HSMNVGMVGL ATANVTASPS SKISPDVITR SNNNVDNSPI SPHYVINRGR KFSAIEKVVE 360 RRQRRMIKNR ESAARSRARK QAYTFELEAE VAKLKELNRE LQRKQEEIME MKKNKDLDPA 420 CRPRISKIQC LRRTLTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

MNFRNFGVGD NHPTWDAMHG KTPANNNVTS TTLLRQPSTI YSLTFDEFQS TMGGIGKDFG  60
SMNMDELLKN IWTAEETQAM VFSAVAAAGG VEGHNNNSNN NPINCSGLQR QGSLTLPRTL  120
SQKTVEEVWR DLIKESGGEA NDGGSGGNGG SSNPQMQATL GEMTLEEFLV RAGVVREDVP  180
QQQQNGKPND NGWFGDFPRP NNNNTSLLLG FQQPNRSNGN GNLGENTNLV SKQQPPPLSL  240
NSNHSQRQAQ HQHQHQQHPP PLFPKPANVT FAGAPTHLLN NAHQHASPGR RGGLIGVAAE  300
HSMNVGMVGL ATANVTASPS SKISPDVITR SNNNVDNSPI SPHYVINRGR KFSAIEKVVE  360
RRQRRMIKNR ESAARSRARK QAYTFELEAE VAKLKELNRE LQRKQEEIME MKKNKDLDPA  420
CRPRISKIQC LRRTLTGPW*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.9872	0.0	flower\| meristem\| root

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.02G131700.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269\|PubMed:10636868}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031133	0.0	KT031133.1 Glycine max clone HN_CCL_105 BZIP transcription factor (Glyma02g14880.3) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001238690.2	0.0	bZIP transcription factor 1
Refseq	XP_025979754.1	0.0	BZIP transcription factor bZIP1 isoform X1
Refseq	XP_028204869.1	0.0	bZIP transcription factor TRAB1-like
Swissprot	Q9M7Q5	6e-98	AI5L4_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBL	A0A0B2RZ62	0.0	A0A0B2RZ62_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBL	I1JET7	0.0	I1JET7_SOYBN; BZIP transcription factor
STRING	GLYMA02G14880.3	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1962	34	81
Representative plant	OGRP3984	10	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.1	4e-80	abscisic acid responsive element-binding factor 1

Link Out ? help Back to Top
Phytozome	Glyma.02G131700.1.p

Publications ? help Back to Top
Chai C, et al. Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance. BMC Genomics, 2015. 16: p. 596 [PMID:26268547] Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions. Plant Mol. Biol., 2018. 97(1-2): p. 149-163 [PMID:29680877]