PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G103200.1.p
Common NameGLYMA_02G103200, LOC102665879
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 278aa    MW: 31095.1 Da    PI: 6.048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G103200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.1e-1280127455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h   Er RR+++++ f+ L  llP++   p  K +K++++ +Av YIk+L+
  Glyma.02G103200.1.p  80 MHIWTERERRKKMRNMFASLHALLPHL---P-SKADKSTVVDEAVAYIKNLE 127
                          56678*********************6...3.8****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.13E-1174131No hitNo description
PROSITE profilePS5088813.75176126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-1576139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-1579140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-981127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.5E-884132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MTLLTVEDQS LHDMNFLWEN HSWDPSNSDN SGESKENMKS LDQVEEKDEA LMNKKRNRDQ  60
GNITSGEGKG EKCRESDHEM HIWTERERRK KMRNMFASLH ALLPHLPSKA DKSTVVDEAV  120
AYIKNLEKTL EKLEKQKQER VQCVSTFGCE PSMFVTGQGS SNNNISNAII GTTSNALSFP  180
VAFDKTWASA NLVLNIFGDE AQFSICTAHK PGLMTTIGFV LEKYKIEVIT ANISCIGYGN  240
ACMIQAHGKR VSHQFLDANS VEEIYKQAAG EIMLWIG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G103200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006574890.10.0transcription factor bHLH95
TrEMBLK7K7J00.0K7K7J0_SOYBN; Uncharacterized protein
STRINGGLYMA02G11500.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Representative plantOGRP12261548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-23bHLH family protein