 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.02G025500.2.p |
Common Name | GLYMA_02G025500, LOC100782014 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
bHLH |
Protein Properties |
Length: 238aa MW: 25635.2 Da PI: 6.5197 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G025500.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 21.8 | 3.4e-07 | 143 | 169 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 4 ahnerErrRRdriNsafeeLrellPka 30
+h+ +Er RR++i +++ +L++l+P +
Glyma.02G025500.2.p 143 SHSLAERARREKISERMKTLQDLVPGC 169
8************************86 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 238 aa
Download sequence Send
to blast |
MDPAAIMNGA ANTTSFHLSE IWQFPPPNSP DALGLRRPHF AHGSFADFAP GPTRDADPAS 60 IAHKKPRHAA GEEEESAKGA STTNAVDEGG GGDGKRIKAS ESGEGGRENS SGKPAEQSGK 120 PPSEPPKQDY IHVRARRGQA TDSHSLAERA RREKISERMK TLQDLVPGCN KFLSMKLEAV 180 NSRMESGIEV FPPKDFDQQT FDTTDMPFAS QATREYSRGS SSEWLHMQVG GGFERAT*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT146684 | 1e-41 | BT146684.1 Medicago truncatula clone JCVI-FLMt-9L20 unknown mRNA. |