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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.02G022300.1.p |
Common Name | GLYMA_02G022300 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HD-ZIP |
Protein Properties |
Length: 346aa MW: 39145.3 Da PI: 4.3928 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G022300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58.9 | 8.7e-19 | 86 | 139 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa+ k
Glyma.02G022300.1.p 86 KKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFK 139
56689***********************************************98 PP
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2 | HD-ZIP_I/II | 131.3 | 3.7e-42 | 86 | 177 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrl++eqv++LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlEkdy +Lk++yd+lk++ e+L +e+++L++e+
Glyma.02G022300.1.p 86 KKRRLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGVLKASYDRLKSDYESLVQENDKLKAEV 175
9**************************************************************************************999 PP
HD-ZIP_I/II 92 ke 93
++
Glyma.02G022300.1.p 176 NS 177
75 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MASGKLYAGS NMSLLLQNER LPCSSEVLES LWAQTSNPAS FQGSKPVVDF ENVSGSRMTD 60 RPFFQALEKE ENCDEDYEGC FHQPGKKRRL TSEQVQFLER NFEVENKLEP ERKVQLAKEL 120 GLQPRQVAIW FQNRRARFKT KQLEKDYGVL KASYDRLKSD YESLVQENDK LKAEVNSLES 180 KLILRDKEKE ENSDDKSSPD DAVNSSSPHN NKEPMDLLII SKNATTTTTS ENGTKVLSPL 240 PLPIMVTCCK QEDANSAKSD VLDSDSPHCT SFVEPADSSH AFEPEDHSED FSQDEEDNLS 300 ENLLMTFPSS CCLPKVEEHC YDGPPENSCN FGFQVEDQTF CFWPY*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 133 | 141 | RRARFKTKQ |