 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Glyma.01G013600.4.p |
| Common Name | GLYMA_01G013600 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
bZIP |
| Protein Properties |
Length: 341aa MW: 36040.9 Da PI: 8.7038 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.01G013600.4.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 29.5 | 1.7e-09 | 309 | 333 | 1 | 25 |
XXXXCHHHCHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKk 25
e+elkr+rrkq+NRe+ArrsR+RK+
Glyma.01G013600.4.p 309 ERELKRQRRKQSNRESARRSRLRKQ 333
89**********************9 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MGSSEMDKTP KEKESKTPPP PPTSQEQSST TSTGTINPEW PGFQAYSPIP PHGFLASNPQ 60
AHPYMWGVQQ FMPPYGTPPH PYVAMYPPGG IYAHPSMPPG SYPFSPFAMP SPNGIAEASG 120
NTPGSMEADG KPPEVKEKLP IKRSKGSLGS LNMITGKNNE HGKTPGTSAN GIHSKSGESA 180
SEGEGTSEGS DANSQNDSQL KSGGRQDSFE DEPSQNGSLA YTAQNGGLNT PHTVVNQTMS 240
IIPISAGGAP GAVPGPTTNL NIGMDYWGTP ASSNIPALGR KVPSTAVAGG MVTVGSRDSA 300
QSQLWLQDER ELKRQRRKQS NRESARRSRL RKQVMESTLW *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 325 | 331 | RRSRLRK |
| 2 | 325 | 332 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF369791 | 0.0 | AF369791.1 Phaseolus vulgaris bZIP transcription factor 3 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-113 | basic region/leucine zipper transcription factor 16 |
