 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.01G013600.1.p |
| Common Name | GLYMA_01G013600, LOC100101882 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
bZIP |
| Protein Properties |
Length: 416aa MW: 44338.6 Da PI: 6.3589 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.01G013600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 67.6 | 2e-21 | 310 | 372 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ +++l se+
Glyma.01G013600.1.p 310 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSDYEQLVSEN 372
89*********************************************************9998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MGSSEMDKTP KEKESKTPPP PPTSQEQSST TSTGTINPEW PGFQAYSPIP PHGFLASNPQ 60
AHPYMWGVQQ QFMPPYGTPP HPYVAMYPPG GIYAHPSMPP GSYPFSPFAM PSPNGIAEAS 120
GNTPGSMEAD GKPPEVKEKL PIKRSKGSLG SLNMITGKNN EHGKTPGTSA NGIHSKSGES 180
ASEGEGTSEG SDANSQNDSQ LKSGGRQDSF EDEPSQNGSL AYTAQNGGLN TPHTVVNQTM 240
SIIPISAGGA PGAVPGPTTN LNIGMDYWGT PASSNIPALG RKVPSTAVAG GMVTVGSRDS 300
AQSQLWLQDE RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEALKEE NASLRSEVNR 360
IRSDYEQLVS ENSALKERLG ELPANDDHHR SCRNDQHVGN DTQQSGQTEA MPGGQ*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 326 | 332 | RRSRLRK |
| 2 | 326 | 333 | RRSRLRKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF369791 | 0.0 | AF369791.1 Phaseolus vulgaris bZIP transcription factor 3 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT2G35530.1 | 1e-138 | basic region/leucine zipper transcription factor 16 |
