 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.01G009600.1.p |
Common Name | GLYMA_01G009600, LOC100810146 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
G2-like |
Protein Properties |
Length: 271aa MW: 30348.2 Da PI: 9.2032 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.01G009600.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 104.5 | 6.4e-33 | 21 | 75 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt +LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl
Glyma.01G009600.1.p 21 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 75
79****************************************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MEGGGREGYN GVIMTMTRDP KPRLRWTADL HDRFVDAVTK LGGPDKATPK SVLRLMGLKG 60 LTLYHLKSHL QKYRLGQQAQ KQNEEVHKEN SRCSYVNFSN RSLAPNTSYR GDDEGGEIPI 120 AEALRCQIEV QKRLEEQLKV QKKLQMRIEA QGKYLQSVLE KAQRSLSLDG PGSLEASRAE 180 LTEFNSALSN FMENMNKDSK QNIIEVNNFY SKSHGSAFYN QEVGREQNRD QKPKVEGGSI 240 QFDLNIKGSN DLVSAGGAEM DANMVSSYRV *
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4r_A | 2e-18 | 21 | 74 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-18 | 21 | 74 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-18 | 21 | 74 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-18 | 21 | 74 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-126 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |