PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D11G0932
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family BES1
Protein Properties Length: 737aa    MW: 83036.2 Da    PI: 5.7926
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D11G0932genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822140.31.8e-43742122133
       DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas..aspess 93 
                  g+ r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv  DGtt++   +gs+p  ++++   ss+s   s++ +
  Gh_D11G0932  74 GAWRSRPLEEKERTKLRERHRRAITARILAGLRKHGNYNLRVRADINDVIAALAREAGWVVLSDGTTFPsrsQGSRPAgDSSAGLTSSSSqmLSQQVP 171
                  78899***************************************************************988889999975555444444423333333 PP

       DUF822  94 lq.sslkssalaspvesysaspksssfpspssldsislasa 133
                   + ++ +ss   + ve  ++ +k + +p p+ +d  s+ ++
  Gh_D11G0932 172 PTsLQGVSSGYCASVEYNACHMKGVFMPTPAPYDLSSSGHS 212
                  3336678999999*******************998876543 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.3E-3877211IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.95E-181254693IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.4E-199257709IPR013781Glycoside hydrolase, catalytic domain
PfamPF013737.3E-103263683IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66294308IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66315333IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66337358IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060341349IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008422.3E-8420429IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.9E-66430452IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66503522IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66537553IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66554565IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.9E-66572595IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.3E-8575585IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007501.9E-66612634IPR001554Glycoside hydrolase, family 14
PRINTSPR008422.3E-8663677IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008422.3E-8678692IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    Send to blast
MSADMQKLIG ANEEDDEEEI EMDVKEEDNE DHENGQKHIA AQMMLGADGV MPSTSHQFQI  60
QQQLQEQVST PGGGAWRSRP LEEKERTKLR ERHRRAITAR ILAGLRKHGN YNLRVRADIN  120
DVIAALAREA GWVVLSDGTT FPSRSQGSRP AGDSSAGLTS SSSQMLSQQV PPTSLQGVSS  180
GYCASVEYNA CHMKGVFMPT PAPYDLSSSG HSQSSGMVGN GGEQTESLPL IAGSMEVINE  240
QIIGLPPKLP ERDFAGTPYV PVYVMLPLGV VNMKCELVDP DGLLKQLRVL KSINVDGVMI  300
DCWWGIVEAD APQEYNWNGY RRLFKMVHEL KLKLQVVMSF HECGGNVGDD VCIPLPHWVA  360
EIGRSNPDIF FTDREGRRNT ECLSWGIDKE RVLRGRTAVE VYFDFMRSFR VEFNEFFEDG  420
IISMVEVGLG PCGELRYPSC PVKHGWRYPG IGEFQCYDQY MLKSLMKAAE MRGHSFWARG  480
PDNAGSYSSH PHETGFFCDE GDYDGYYGRF FLNWYSQLLI NHGDLVLSLA KLAFEGSCIA  540
AKLPGIHWWY KTSSHAAELT AGFYNPCNRD GYIAIAAMLH KHGAALNFAR AELQFLEQRE  600
DLQEALANPQ GLVWQVLNAA WETCITVVSE NAFVCHDRVG YNKILENVKP VNDPDGRHFS  660
SFTYLRLTPL LMERQNFMEF ERFVKRMHGE AVLYLQRKEI MSFGKEKLET VSISYGKERL  720
KYLDQSMLKK KTDLSIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wds_A1e-15225969011444Beta-amylase
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016694833.10.0PREDICTED: beta-amylase 7-like isoform X1
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A1U8K1H70.0A0A1U8K1H7_GOSHI; Beta-amylase
STRINGGorai.007G099100.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29452535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]