PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D11G0932 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | BES1 | ||||||||
Protein Properties | Length: 737aa MW: 83036.2 Da PI: 5.7926 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 140.3 | 1.8e-43 | 74 | 212 | 2 | 133 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas..aspess 93 g+ r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv DGtt++ +gs+p ++++ ss+s s++ + Gh_D11G0932 74 GAWRSRPLEEKERTKLRERHRRAITARILAGLRKHGNYNLRVRADINDVIAALAREAGWVVLSDGTTFPsrsQGSRPAgDSSAGLTSSSSqmLSQQVP 171 78899***************************************************************988889999975555444444423333333 PP DUF822 94 lq.sslkssalaspvesysaspksssfpspssldsislasa 133 + ++ +ss + ve ++ +k + +p p+ +d s+ ++ Gh_D11G0932 172 PTsLQGVSSGYCASVEYNACHMKGVFMPTPAPYDLSSSGHS 212 3336678999999*******************998876543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 9.3E-38 | 77 | 211 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 2.95E-181 | 254 | 693 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 1.4E-199 | 257 | 709 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 7.3E-103 | 263 | 683 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 294 | 308 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 315 | 333 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 337 | 358 | IPR001554 | Glycoside hydrolase, family 14 |
PROSITE pattern | PS00506 | 0 | 341 | 349 | IPR018238 | Glycoside hydrolase, family 14, conserved site |
PRINTS | PR00842 | 2.3E-8 | 420 | 429 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 1.9E-66 | 430 | 452 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 503 | 522 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 537 | 553 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 554 | 565 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 1.9E-66 | 572 | 595 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 2.3E-8 | 575 | 585 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 1.9E-66 | 612 | 634 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 2.3E-8 | 663 | 677 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00842 | 2.3E-8 | 678 | 692 | IPR001371 | Glycoside hydrolase, family 14B, plant |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 737 aa Download sequence Send to blast |
MSADMQKLIG ANEEDDEEEI EMDVKEEDNE DHENGQKHIA AQMMLGADGV MPSTSHQFQI 60 QQQLQEQVST PGGGAWRSRP LEEKERTKLR ERHRRAITAR ILAGLRKHGN YNLRVRADIN 120 DVIAALAREA GWVVLSDGTT FPSRSQGSRP AGDSSAGLTS SSSQMLSQQV PPTSLQGVSS 180 GYCASVEYNA CHMKGVFMPT PAPYDLSSSG HSQSSGMVGN GGEQTESLPL IAGSMEVINE 240 QIIGLPPKLP ERDFAGTPYV PVYVMLPLGV VNMKCELVDP DGLLKQLRVL KSINVDGVMI 300 DCWWGIVEAD APQEYNWNGY RRLFKMVHEL KLKLQVVMSF HECGGNVGDD VCIPLPHWVA 360 EIGRSNPDIF FTDREGRRNT ECLSWGIDKE RVLRGRTAVE VYFDFMRSFR VEFNEFFEDG 420 IISMVEVGLG PCGELRYPSC PVKHGWRYPG IGEFQCYDQY MLKSLMKAAE MRGHSFWARG 480 PDNAGSYSSH PHETGFFCDE GDYDGYYGRF FLNWYSQLLI NHGDLVLSLA KLAFEGSCIA 540 AKLPGIHWWY KTSSHAAELT AGFYNPCNRD GYIAIAAMLH KHGAALNFAR AELQFLEQRE 600 DLQEALANPQ GLVWQVLNAA WETCITVVSE NAFVCHDRVG YNKILENVKP VNDPDGRHFS 660 SFTYLRLTPL LMERQNFMEF ERFVKRMHGE AVLYLQRKEI MSFGKEKLET VSISYGKERL 720 KYLDQSMLKK KTDLSIN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wds_A | 1e-152 | 259 | 690 | 11 | 444 | Beta-amylase |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016694833.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X1 | ||||
Swissprot | O80831 | 0.0 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A1U8K1H7 | 0.0 | A0A1U8K1H7_GOSHI; Beta-amylase | ||||
STRING | Gorai.007G099100.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2945 | 25 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 0.0 | beta-amylase 7 |
Publications ? help Back to Top | |||
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