PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D05G2434 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 139aa MW: 15687 Da PI: 10.8685 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.7 | 3.3e-15 | 70 | 129 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + r + ++kNRe+A sR+RK+a+ +eLe++v+ L++eN +L+k ++ + +l +++ Gh_D05G2434 70 DLRLKLMMKNRESAAQSRARKQAYKKELEREVAHLKEENAKLRKHQKKVMAAINQLPKKN 129 568899******************************************999999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.0E-12 | 67 | 131 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.829 | 69 | 125 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.89E-17 | 72 | 116 | No hit | No description |
Pfam | PF00170 | 3.3E-13 | 72 | 129 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.38E-9 | 72 | 120 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-12 | 73 | 125 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 74 | 89 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence Send to blast |
MEEVGKDISL SSLNGISLQG KHGTLISTAA TNPAFPSMIL QDFFGHTLQQ YTSNNILGKR 60 AQGNNENPDD LRLKLMMKNR ESAAQSRARK QAYKKELERE VAHLKEENAK LRKHQKKVMA 120 AINQLPKKNR LSRSLTTPF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016676367.1 | 2e-88 | PREDICTED: protein FD-like | ||||
TrEMBL | A0A1U8IE73 | 4e-87 | A0A1U8IE73_GOSHI; protein FD-like | ||||
STRING | Gorai.009G269300.1 | 1e-48 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-24 | bZIP family protein |