PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D05G1758 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 215aa MW: 23635.6 Da PI: 10.3836 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.3 | 2.1e-15 | 145 | 195 | 3 | 53 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ++r +r++kNRe+A rsR+RK+a++ eLe kv+ L++eN +L+ + e++ Gh_D05G1758 145 NDRRHKRMIKNRESAARSRARKQAYTTELELKVAHLQEENAKLRRQQEKIL 195 689*****************************************8776654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-12 | 143 | 207 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.266 | 145 | 194 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.1E-13 | 146 | 194 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.94E-11 | 147 | 194 | No hit | No description |
CDD | cd14707 | 3.99E-28 | 147 | 197 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-14 | 147 | 194 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 150 | 165 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
MEEVWKDISL ASLSDHPVDS ILSTRTKNPN FPSMILLNFL ATPINKEPPT PRTSGVSSND 60 TSSTEGPAPF VPGTILSLKS GFGSACRCTE TGDPMRPNLE VNARAGVPAA PSFSSYSSGF 120 RGFGSPEAFP SFCTKRAPES NENSNDRRHK RMIKNRESAA RSRARKQAYT TELELKVAHL 180 QEENAKLRRQ QEKILAARDQ VPKKNTLSRT LTAPF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016687682.1 | 1e-157 | PREDICTED: protein FD-like | ||||
TrEMBL | A0A1U8JBJ3 | 1e-156 | A0A1U8JBJ3_GOSHI; protein FD-like | ||||
STRING | Gorai.009G192500.1 | 1e-154 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 8e-47 | bZIP family protein |