PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D01G0926 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 180aa MW: 19827.6 Da PI: 10.2474 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.1 | 2.5e-15 | 110 | 159 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++ r +rk+kNRe+A rsR+RK+a++ eLe +v+ L +eN +L+ + ++l Gh_D01G0926 110 DDPRHKRKIKNRESAARSRARKQAYTNELELEVARLLEENVKLRRQQDKL 159 6889****************************************877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-11 | 108 | 172 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.07 | 110 | 159 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.62E-25 | 113 | 165 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.3E-13 | 113 | 160 | No hit | No description |
SuperFamily | SSF57959 | 1.06E-10 | 113 | 160 | No hit | No description |
Pfam | PF00170 | 1.5E-12 | 113 | 159 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 115 | 130 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MEEVWGDITL ASLNDHPAVT PTANPPSFPS VILQDFLAIP INKEMPPTAR SGCGTSLTEE 60 ITLFGSLPPT PATLFTLNAR SIASAAVKAP APSFPSSCRK KGQENGENSD DPRHKRKIKN 120 RESAARSRAR KQAYTNELEL EVARLLEENV KLRRQQDKLL ASPRQIPKRN TLCRTLTAPF |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Highly expressed in shoot apex. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980, ECO:0000269|PubMed:25661797}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012465462.1 | 1e-125 | PREDICTED: protein FD-like | ||||
Refseq | XP_012465469.1 | 1e-125 | PREDICTED: protein FD-like | ||||
Refseq | XP_012465476.1 | 1e-125 | PREDICTED: protein FD-like | ||||
Swissprot | Q84JK2 | 1e-39 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2P5RW44 | 1e-128 | A0A2P5RW44_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.002G122200.1 | 1e-124 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 5e-34 | bZIP family protein |