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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSVIVT01037375001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
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Family |
GRAS |
Protein Properties |
Length: 401aa MW: 45744.6 Da PI: 6.4429 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01037375001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 254.9 | 2.9e-78 | 47 | 255 | 1 | 216 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
l++lLl+cA++v+sg+le+++ +L+++s+las dgd+mqR+aayfteALa r+++++s+l kal++++ s se + ++klf+e++P+lk
GSVIVT01037375001 47 LIHLLLTCANHVASGSLENVNIALEQISQLASADGDTMQRIAAYFTEALADRILKTWSGLHKALNSTRIS--FPSEDILVRKLFFELFPFLK 136
689*************************************************************999887..5999**************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
++++++N++I ea+ege++vHiiD++ +++QW+aLlqaL++Rpegpp+lRiTg+++ +ke le++++rL++ Ae+l++pf+fn+ +++
GSVIVT01037375001 137 MAYVITNHTIIEAMEGEKMVHIIDLNSAEPAQWIALLQALSARPEGPPHLRITGIHP----QKEVLEQMAHRLTEEAEKLDIPFQFNP-IVS 223
*********************************************************....9**************************.799 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrllde 216
+le+l++e+Lrvk+gEala+++vlqlh++l+
GSVIVT01037375001 224 KLENLDFEKLRVKTGEALAISSVLQLHSFLAY 255
9****************************943 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009739 | Biological Process | response to gibberellin |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MAPMDERSSS VTSSPLQLFS MMSPSPSLGS PYPWLRELKS EERGLCLIHL LLTCANHVAS 60 GSLENVNIAL EQISQLASAD GDTMQRIAAY FTEALADRIL KTWSGLHKAL NSTRISFPSE 120 DILVRKLFFE LFPFLKMAYV ITNHTIIEAM EGEKMVHIID LNSAEPAQWI ALLQALSARP 180 EGPPHLRITG IHPQKEVLEQ MAHRLTEEAE KLDIPFQFNP IVSKLENLDF EKLRVKTGEA 240 LAISSVLQLH SFLAYDDEFL RKKSPLASKN SNGVQLQRVR QKWMAFLMHF LLDFIFLRLF 300 SICFHLFIDS RDDDCMSCEH CTTTLLILGI FFSFFSSKLL CFIFVILGVC KIFDHLSKSF 360 FKPCLVGFCL FLSGFYLFIY FLWKPIELKY DIELISVYDL *
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, root epidermis, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM432274 | 0.0 | AM432274.2 Vitis vinifera contig VV78X112647.12, whole genome shotgun sequence. |