PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr9P30700_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | G2-like | ||||||||
Protein Properties | Length: 109aa MW: 12457.7 Da PI: 11.4274 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 93.9 | 1.3e-29 | 18 | 67 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt+eLH rFv+av+ LGG +kAtPk+il+lm+vkgLt++hvkSHLQ GSMUA_Achr9P30700_001 18 PRIRWTEELHGRFVDAVHVLGGRNKATPKQILQLMGVKGLTISHVKSHLQ 67 8************************************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.075 | 14 | 74 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.9E-27 | 14 | 67 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.11E-15 | 16 | 68 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-23 | 18 | 68 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.2E-9 | 21 | 67 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence Send to blast |
MTCLVRRGVR QYNRSETPRI RWTEELHGRF VDAVHVLGGR NKATPKQILQ LMGVKGLTIS 60 HVKSHLQVCM FPSFRLLQTS LLFYRGRVQE INLSLSLSLQ LSPSVCLLP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-16 | 19 | 75 | 4 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018673571.1 | 3e-44 | PREDICTED: protein PHOSPHATE STARVATION RESPONSE 3-like isoform X2 | ||||
Swissprot | Q700D9 | 3e-20 | MYBF_ARATH; Putative Myb family transcription factor At1g14600 | ||||
TrEMBL | M0U4X7 | 2e-73 | M0U4X7_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr9P30700_001 | 3e-74 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5493 | 37 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 6e-23 | G2-like family protein |