PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P27730_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family BES1
Protein Properties Length: 274aa    MW: 29459.8 Da    PI: 9.7669
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P27730_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822193.95.8e-6021501149
                 DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasa 88 
                            +++ r+ptw+ErEnnkrRERrRRaiaak+y+GLR +Gnyklpk++Dnn Vl+ALc+eAGw+ve+DGttyrkg+kp+e  +++g sas 
  GSMUA_Achr8P27730_001   2 TSGSRTPTWRERENNKRRERRRRAIAAKMYSGLRLYGNYKLPKHCDNNAVLRALCEEAGWTVEEDGTTYRKGCKPTEGRDVVGPSASP 89 
                            5789************************************************************************************ PP

                 DUF822  89 spesslqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsss 149
                            sp ss++       ++sp+ sy++sp+ss+  sp+s+  ++++++       +sl+p+l+ ls +sss
  GSMUA_Achr8P27730_001  90 SPRSSSH-------QPSPCISYNPSPASSTLASPESSTLVTNTKNtasgtegNSLVPWLKSLSPASSS 150
                            ****977.......889999999999999999998888887776678888889999999998876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.0E-634145IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MTSGSRTPTW RERENNKRRE RRRRAIAAKM YSGLRLYGNY KLPKHCDNNA VLRALCEEAG  60
WTVEEDGTTY RKGCKPTEGR DVVGPSASPS PRSSSHQPSP CISYNPSPAS STLASPESST  120
LVTNTKNTAS GTEGNSLVPW LKSLSPASSS TSSKIPNIHH LYIHGGSISA PVTPPLSSPT  180
ARSPRIKTVT PDAAWLAGLR LPSGGPSSPT FSLVSPNPFG LYKEANEFAF GSSSNHIPTT  240
VGLVKPWEGE RIHEEFVSDE LELTLGSSNT RSVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-24680372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7214904e-73KP721490.1 Eucalyptus grandis brassinazole-resistant 1 protein (BES3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009415180.11e-149PREDICTED: protein BZR1 homolog 3-like
SwissprotQ5Z9E51e-87BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLM0TU760.0M0TU76_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P27730_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.18e-76BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]