PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr8P09270_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | CAMTA | ||||||||
Protein Properties | Length: 1131aa MW: 128819 Da PI: 7.9794 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 154.9 | 1.7e-48 | 29 | 137 | 3 | 110 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e ++rwlk+ e++ iL+n++ +e+t++++++p+sgsl+L+nr+++ryfr+DG+sw+kk +gktvrE he+LKvg+ e+l+cyYah+e GSMUA_Achr8P09270_001 29 QEaQTRWLKPVEVLYILQNYKCFEITQKPPQKPPSGSLFLFNRRVLRYFRNDGHSWRKKTNGKTVREGHERLKVGNSEALNCYYAHGE 116 6669************************************************************************************ PP CG-1 90 enptfqrrcywlLeeelekiv 110 +n++fqrr+yw+L+ e+++ GSMUA_Achr8P09270_001 117 QNSNFQRRSYWILDPEYRHLS 137 ****************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 68.748 | 24 | 150 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 6.0E-65 | 27 | 273 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.9E-43 | 30 | 134 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF01833 | 1.6E-6 | 586 | 657 | IPR002909 | IPT domain |
Gene3D | G3DSA:2.60.40.10 | 2.8E-4 | 586 | 670 | IPR013783 | Immunoglobulin-like fold |
SuperFamily | SSF81296 | 8.71E-15 | 587 | 668 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:1.25.40.20 | 8.4E-17 | 782 | 878 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 6.68E-16 | 783 | 879 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 16.759 | 784 | 876 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 3.03E-10 | 789 | 876 | No hit | No description |
Pfam | PF12796 | 3.2E-7 | 811 | 878 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 8.9E-4 | 817 | 846 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.568 | 817 | 849 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 2200 | 856 | 885 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 6.8 | 937 | 959 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 6.76 | 938 | 964 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 5.04E-7 | 940 | 1044 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 0.043 | 994 | 1016 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 6.668 | 997 | 1024 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.0027 | 997 | 1015 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 5.9E-4 | 1017 | 1039 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.889 | 1018 | 1046 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 1.1E-4 | 1020 | 1039 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1131 aa Download sequence Send to blast |
MNIMNISYKI KLLSLPCAVT GFDINKLSQE AQTRWLKPVE VLYILQNYKC FEITQKPPQK 60 PPSGSLFLFN RRVLRYFRND GHSWRKKTNG KTVREGHERL KVGNSEALNC YYAHGEQNSN 120 FQRRSYWILD PEYRHLSNID MTNNLKQPQS MSFIFVHQTR KPCCKYHSLP YRIVQPGMGG 180 TYRSDRLTVR GLLATGPHCA MYCSAVAVQY TVALQQYSTV AVHCYRCSTV HQYTVAVLHR 240 SVHRTILVPS PGRNTGTVRA YEHIVLVHYR EVVELRYNHA SAHFLEPNFF HTLCKHSSYN 300 LSKLKVECSY FCYLNYQCSY ASTMLLKNNV YFATPGDLIM VHSCVFQGRY TPRKILSISN 360 ESSPTLRYST SVSNDLAQCF PSCTGELNEP CQNSCSPVSV EEVSSKFERR NIETSHLNRM 420 DRSESCNQLL LPELNQALRK LKEQLSLDDD EEDNFVSPKK ELLPHGNLNV ETHDLQHLNY 480 EIKNSLDETL QNPLDEFKQM SDGHFDEDGM QYDDMLNNSG MCCCLIYCMR LEKYLFVKVE 540 FIFLVLDEFN KGKQLYTKMF IKNQFEAPLE IDASLTSPQG YLFTMREVAP EWAFSSENTK 600 VIITGNFLCS PSECEWTALF GDTEVPLEIV QDGVFRCLAP QHISGKVKLC VTSGNGKPCS 660 EVHEFEFREK LQNTSSSSTL SRVDALKTSE ELMLLVNLVQ ILLSGHSTSV TQEDELEPEV 720 NPLWKLKGSS NQLELIIGSI LTGSEPPGKL IELILQELLK DKLQQWLSSK HQGEPDDGCL 780 LSKQDQCIIH MISGLGYQWA LHPILDSGMC INYRDSNGWT ALHWAARFGR EEMVASLLAA 840 GASAGAVTDP SSQDPAGQTP ASLAVANGHR GLAGYLSEAA LTNHLFSLTT EKTEILEGSS 900 SVKAERGVDN ISERRAHLQG GTENQLSLKD SLEAVRNATQ AAARIQAAFR AFSFRKKQQA 960 DIVRGIYDMS QTHIYGFSVA SRMHKTILGF RDHKFVKAAV SIQKHYRCWK KRKEFLQLRS 1020 NVVKIQSHFR VHLARKKYKE FLRSVGVLEK IMLRWYRRGV GLRGFRAEPK PIVEEEEDDI 1080 IKVFRQQKVD KALDEALSRV ISVVESPEAR EQYRRMLESY QQAQAELSQC G |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009411794.1 | 0.0 | PREDICTED: calmodulin-binding transcription activator 4-like isoform X1 | ||||
Refseq | XP_009411795.1 | 0.0 | PREDICTED: calmodulin-binding transcription activator 4-like isoform X1 | ||||
Refseq | XP_018686562.1 | 0.0 | PREDICTED: calmodulin-binding transcription activator 4-like isoform X1 | ||||
Swissprot | Q9FYG2 | 1e-161 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | M0TNY0 | 0.0 | M0TNY0_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr8P09270_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6238 | 32 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 1e-125 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Publications ? help Back to Top | |||
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