PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P03510_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 206aa    MW: 23527.6 Da    PI: 10.1073
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P03510_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.52e-301770255
                G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           pr+rWt+eLH++Fveav+ LGG+ +AtPk+i +lm+vkg++++hvkSHLQ+YR+
  GSMUA_Achr7P03510_001 17 PRMRWTEELHRCFVEAVDCLGGETEATPKRIQQLMGVKGISISHVKSHLQMYRS 70
                           9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.621373IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.6E-281471IPR009057Homeodomain-like
SuperFamilySSF466895.73E-161671IPR009057Homeodomain-like
TIGRFAMsTIGR015579.4E-251770IPR006447Myb domain, plants
PfamPF002498.7E-91869IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MRFLGRRVRQ YNRTDAPRMR WTEELHRCFV EAVDCLGGET EATPKRIQQL MGVKGISISH  60
VKSHLQMYRS TSTHCEKNRS TQREAPRHDV LMAYSLPKQR ADAHLGLTRS IQSPTFEELL  120
RDWAAKNMAS IFPRDTLTED NSQLLQLAYS QRSPPKETNR EPSLSSFAYR NQRSLADTGD  180
RGSSAAKKHV NLELTISSPA CLSSFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A8e-161870355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-161870355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-161870355Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-161870355Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408257.11e-150PREDICTED: probable transcription factor KAN4
TrEMBLM0TEE11e-153M0TEE1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P03510_0011e-154(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-26G2-like family protein