PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P17400_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 387aa    MW: 43144.4 Da    PI: 6.9027
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P17400_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.72.1e-071902401363
                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             R + +rsR RK+++i+eLe+ v+ L++   +L+ ++ +l +   +l +e+
  GSMUA_Achr5P17400_001 190 RRHSGQRSRVRKLQYIAELERTVDMLQTLGADLATRVASLFQYRLALSMEN 240
                            48999****************************999999887777777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0014182242IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-5186240No hitNo description
CDDcd147036.14E-15187231No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-7191252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MSWPAPLPPR CPFQSKGVPR RASDSAPQTP QNDTGSYAQN LMDEPPSWVD DLLAEPASGH  60
RGISLRRSSS DPVSLLEVAT SFQGPISPAN EEDALSDSLL HESLEAAGAS EVDGGFEAGS  120
WVFGPNSPRQ RSKLTDSESS IVTALLENVP SNPLQYLTVD YPSTSVTSKP HGMEDDYTPL  180
ANPDSHKLQR RHSGQRSRVR KLQYIAELER TVDMLQTLGA DLATRVASLF QYRLALSMEN  240
KKLRQQIASL RQEKNIKDGQ HQSLKNEAER LRMICGRHRR SKSVAACFEM DPSELDPSRI  300
NWQMLDLGKL NLGGSVFLWQ RSKTTLSRRV VSFTWNCEQG KMLNYDVKVC TLADVISTAT  360
SHDLSNYYLF SEIHAFAHNG NYHLICL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009401170.10.0PREDICTED: basic leucine zipper 6
RefseqXP_009401171.10.0PREDICTED: basic leucine zipper 6
RefseqXP_018681527.10.0PREDICTED: basic leucine zipper 6
TrEMBLM0SZB90.0M0SZB9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P17400_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81372631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-23bZIP family protein