PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P32500_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 340aa    MW: 36928 Da    PI: 6.8435
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P32500_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like841.6e-26228280156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W++eLH+rF  a++qLG   +AtPk+i+e+mkv+gLt+++vkSHLQkYRl+
  GSMUA_Achr4P32500_001 228 KARRCWSQELHRRFTVAIQQLG---VATPKQIREVMKVEGLTNDEVKSHLQKYRLH 280
                            68*******************4...89***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-24226281IPR009057Homeodomain-like
SuperFamilySSF466891.52E-14226281IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-23228280IPR006447Myb domain, plants
PfamPF002494.0E-6230278IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MIEPAAMGSE VGLALQLCAM RTVGGFVKDA ATESAGRAAR LVESIKILEE EKRKIEAFQR  60
ELPLCMHLLG EVIDGLKKET ERCGGGCFGR VLQELLPVES RVEEDGEVKV DDKMNWMSSA  120
QLWSDNYGEN DISHENHEVM ICGKKKEELF NLFLECKSPG GDGAFLPFEA LSTVSASSEE  180
KKPAAALPDR RGCGRGPKSV GRAPESSPAP ATVCGRLGFQ SQHQPSRKAR RCWSQELHRR  240
FTVAIQQLGV ATPKQIREVM KVEGLTNDEV KSHLQKYRLH AGKLPNASSA MASPPGAVGG  300
SSCVRLQQQC ISPPPQQSVS PSGSLSTEPS SAERSPELYE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018680130.10.0PREDICTED: myb family transcription factor EFM-like
TrEMBLM0SU120.0M0SU12_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P32500_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.13e-36G2-like family protein