PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P28210_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 322aa    MW: 36327 Da    PI: 5.2393
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P28210_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.11.5e-31211265256
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            +r++W++eLH+rFv a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  GSMUA_Achr4P28210_001 211 ARRCWSQELHRRFVLAIQQLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 265
                            699**************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.439207267IPR017930Myb domain
SuperFamilySSF466898.42E-16211268IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.5E-28211268IPR009057Homeodomain-like
PfamPF002491.2E-6212263IPR001005SANT/Myb domain
TIGRFAMsTIGR015575.5E-26212265IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MGSAVFEMGL ELELCATRVV GDFVKEVSAI ESGGSGRASR LEESIKFLEE EKRKIEAFRR  60
EVPICMRLLR EVIERLRMEI ERCRCESFGH VFEEFMPLKS KVEDDGGVKV ETDCRDKMNW  120
MSSVQLWSDN YSENDDEEKI VSNEQDGAVD HRQGKGKSLE CKSRSSGVEF LPFKALSPLA  180
ASSEEEEEKP ASALPELSLQ SPAINRTLDL ARRCWSQELH RRFVLAIQQL GGAQVATPKQ  240
IRELMKVDGL TNDEVKSHLQ KYRLHTERVH AQRLPNAVAT ADRAVVVLGG LWDREEQYTS  300
SSQQSFSQSG SPMSPFQLAG SR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009397728.10.0PREDICTED: myb family transcription factor EFM
TrEMBLM0SST30.0M0SST3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P28210_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.19e-44G2-like family protein