PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr2P20490_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 243aa MW: 26695.1 Da PI: 5.4603 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.6 | 4.2e-16 | 162 | 213 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 l+r++r++kNRe+A rsR+RK+a++ eLe v Le+eN +L e ee k+ GSMUA_Achr2P20490_001 162 LRRQKRMIKNRESAARSRERKQAYTVELESLVTRLEEENVTLVREQEEQHKM 213 79****************************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.6E-14 | 156 | 214 | No hit | No description |
SMART | SM00338 | 1.3E-11 | 159 | 223 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.346 | 161 | 209 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.0E-15 | 162 | 214 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.31E-11 | 162 | 212 | No hit | No description |
CDD | cd14707 | 1.29E-20 | 163 | 213 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 166 | 181 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MASPSSSASS DVARQSSAYA SAASCDQTEA LGSVSMDHLL RGFCAQPPFP LPLPRNAAGT 60 TADVVWEIPD GAGSGYEDAA AGADGEVTLE EFLARTGAVR EEDVGVSTGF VVDPAIGGRF 120 CQQEQQLPLE NPMLGFGSAL ESGGRRARKR VVLDDPVDKV VLRRQKRMIK NRESAARSRE 180 RKQAYTVELE SLVTRLEEEN VTLVREQEEQ HKMRFQQLMV NIIPVNESRK PLPVLRRTHS 240 MQW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009390055.1 | 1e-179 | PREDICTED: G-box-binding factor 4-like isoform X2 | ||||
Swissprot | Q0JHF1 | 1e-36 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | M0S9P0 | 1e-178 | M0S9P0_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr2P20490_001 | 1e-178 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 6e-27 | bZIP family protein |
Publications ? help Back to Top | |||
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