PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM5G858197_P02 | ||||||||
Common Name | Zm.81747 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 260aa MW: 27553 Da PI: 9.5938 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.2 | 9.9e-15 | 178 | 227 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 + +r++r++kNRe+A rsR+RK+a+i+eLe v Le+eN +L e ee GRMZM5G858197_P02 178 AMQRQKRMIKNRESAARSRERKQAYIAELESLVTHLEEENAELLREQEER 227 689*************************************9987766543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-8 | 176 | 238 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.634 | 178 | 226 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.1E-13 | 178 | 235 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.09E-19 | 180 | 230 | No hit | No description |
SuperFamily | SSF57959 | 3.63E-11 | 181 | 228 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-13 | 181 | 236 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 183 | 198 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MASSRVMPSS SPSHTASDLA RLAQAASRPG GGGSGLGSMN VEELLRGIYS DMPTPAPPAS 60 EPERPRSPAP APEVATRRTA EEVWKEITGG GGSGEPVPPV AAQAAVPAGG GGAGGPEMTL 120 EDFLAREEGA VKEDGVRVSG PSAPAMGFLG GAEGVGVPGG GGGRGRKRQL MDPVDRAAMQ 180 RQKRMIKNRE SAARSRERKQ AYIAELESLV THLEEENAEL LREQEERHQK RLKELLERVT 240 PVILRKKPSG DLRRTNSMQW |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.81747 | 0.0 | ear| embryo| endosperm| meristem| ovary| root |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM5G858197 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM5G858197_P02 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT054149 | 0.0 | BT054149.1 Zea mays full-length cDNA clone ZM_BFb0134E03 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001354068.1 | 0.0 | uncharacterized protein LOC100280716 | ||||
Swissprot | Q0JHF1 | 9e-94 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | A0A3L6FM56 | 0.0 | A0A3L6FM56_MAIZE; G-box-binding factor 4 | ||||
TrEMBL | B7ZXV7 | 0.0 | B7ZXV7_MAIZE; BZIP transcription factor | ||||
STRING | GRMZM5G858197_P02 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 | Representative plant | OGRP9845 | 4 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 7e-19 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM5G858197_P02 |
Publications ? help Back to Top | |||
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