 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GRMZM2G430522_P02 |
| Common Name | Zm.4437 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
| Family |
NAC |
| Protein Properties |
Length: 387aa MW: 42641.9 Da PI: 7.76 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GRMZM2G430522_P02 | genome | MaizeSequence | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 167.5 | 4.5e-52 | 81 | 208 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv++yL++kv + + i+evd++++ePw+Lp +++ +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev
GRMZM2G430522_P02 81 LPPGFRFHPTDEELVTFYLAAKVFNGACCG-IDIAEVDLNRCEPWELPDAARMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREV 171
79************************9777.56***************8888899************************************* PP
NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
l++ +g+l g+kktLvfykgrap+gekt+Wv+heyrl
GRMZM2G430522_P02 172 LNAaTGALLGMKKTLVFYKGRAPRGEKTKWVLHEYRL 208
*9878899***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010014 | Biological Process | meristem initiation |
| GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 387 aa
Download sequence Send
to blast |
MVLWRTGGAW WCYLARAPHY KAPPHTIPQL RASSHHLIDL TTCLRSKPLC MHHHHQDQAM 60
GDALWDLLGE EMAAAGGEHG LPPGFRFHPT DEELVTFYLA AKVFNGACCG IDIAEVDLNR 120
CEPWELPDAA RMGEREWYFF SLRDRKYPTG LRTNRATGAG YWKATGKDRE VLNAATGALL 180
GMKKTLVFYK GRAPRGEKTK WVLHEYRLDG DFAAARRPCK EEWVICRILH KAGDQYSKLM 240
MVKSPYYLPM AMDPSSFCFQ EDPTGHPLPN PSGCTPFHHG HPHHSMQPPP PLPPSNHAGK 300
AVFTGAAAAC CMQQEPADGS NSAVLPMPPF PPFTPIVAGK PAAPAPPPQV VNAGPQEPPP 360
PTWLEAYLQH TGGILYEMGP TAAPRGA
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-47 | 81 | 231 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-47 | 81 | 231 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-47 | 81 | 231 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-47 | 81 | 231 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 5e-47 | 81 | 231 | 20 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 5e-47 | 81 | 231 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 5e-47 | 81 | 231 | 17 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT061270 | 0.0 | BT061270.1 Zea mays full-length cDNA clone ZM_BFb0128J16 mRNA, complete cds. |
