 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
GRMZM2G114613_P05 |
Common Name | cl889_1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
|
Family |
LSD |
Protein Properties |
Length: 112aa MW: 11581.6 Da PI: 8.6516 |
Description |
LSD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GRMZM2G114613_P05 | genome | MaizeSequence | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-LSD1 | 50.9 | 2.5e-16 | 18 | 42 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
Cg+C+t+L+YP+GApsV+Ca+C+++
GRMZM2G114613_P05 18 CGQCQTVLMYPYGAPSVKCAVCNFI 42
***********************86 PP
|
Expression -- UniGene
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UniGene ID |
E-value |
Expressed in |
Zm.4177 | 1e-175 | embryo| endosperm| meristem| ovary| pollen| root| shoot |
Functional Description ? help
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Source |
Description |
UniProt | Putative zinc finger that may be involved in programmed cell death and defense response. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT069674 | 0.0 | BT069674.1 Zea mays full-length cDNA clone ZM_BFb0207B08 mRNA, complete cds. |