PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00003095.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | MYB_related | ||||||||
Protein Properties | Length: 141aa MW: 15984.2 Da PI: 9.7386 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.1 | 1.7e-07 | 43 | 91 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 + eE e l+ +v+++G g+Wk I + ++R+ +k +w+ + FANhyb_rscf00003095.1.g00001.1 43 FRSEEAEALLAGVAKHGVGNWKIILEDSEfgsilTRRSNMKLKYKWRHW 91 568************************9999**9999999999999865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.0035 | 39 | 94 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-8 | 43 | 93 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.45E-10 | 43 | 102 | IPR009057 | Homeodomain-like |
CDD | cd11660 | 6.26E-13 | 43 | 89 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MLLRSERKLL MFSATRLLPS RVQHSIASPS STMLVLLSHN PVFRSEEAEA LLAGVAKHGV 60 GNWKIILEDS EFGSILTRRS NMKLKYKWRH WSRRPSVNSP SMADEALEEA GSVSDTKEED 120 RDSETKKRKR MPAEDTEPST C |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024177942.1 | 1e-34 | single myb histone 4-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF34552 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72740.2 | 4e-14 | MYB_related family protein |