PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000130.1.g00007.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 347aa    MW: 37749.4 Da    PI: 7.8837
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000130.1.g00007.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.81.7e-3190147359
                                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                     Dg++WrKYGqK+ kg+++prsYYrCt+  gCpv+k+v+rsaed++++++tYeg+Hnh+
  FANhyb_rscf00000130.1.g00007.1  90 DGCQWRKYGQKMAKGNPCPRSYYRCTMVaGCPVRKQVQRSAEDKTILITTYEGNHNHP 147
                                     9**************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-3373149IPR003657WRKY domain
SuperFamilySSF1182907.06E-2882149IPR003657WRKY domain
PROSITE profilePS5081129.80383149IPR003657WRKY domain
SMARTSM007742.3E-3788148IPR003657WRKY domain
PfamPF031061.3E-2790147IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MLNQITKSYN ELQAQLRMIR LQEQLQTCAE DGYLDPKLSS LHDDQSPKSS NHQDKDQEQV  60
LAATDDHEQV PLRRTRVSVR ARSEAPMIID GCQWRKYGQK MAKGNPCPRS YYRCTMVAGC  120
PVRKQVQRSA EDKTILITTY EGNHNHPLPP AARSMANTTS AAAAMLVAGS TTSKEGTQPA  180
TGLFSSLHEQ PFGSSMATFS TSSPFPTITL DMTRTPISNP NPMQLIMHSS APTSFPLPLQ  240
GYNNHPIIGH PLRLNFPQPN YAAAMQLDRS HSSMVETITA AITSDPKFTT ALAAAISSSM  300
NNVENIKTGL QGSSDDTSSL NSNGNEVYAA LSGSPQLPKS CTTFSTT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-2275151176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004288357.10.0PREDICTED: probable WRKY transcription factor 47 isoform X2
SwissprotQ9XEC33e-67WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2P6RF140.0A0A2P6RF14_ROSCH; Putative transcription factor WRKY family
STRINGXP_004288357.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01720.15e-56WRKY family protein