PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon20034491_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 70aa    MW: 7769.8 Da    PI: 11.2091
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon20034491_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-172370253
                               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                                       y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l
  FANhyb_icon20034491_s.1.g00001.1 23 TYRGVRRRS-NGKWVSEIREPK----KpNRIWLGTFLTPEMAAVAYDVAALAL 70
                                      69****888.8*********94....468********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381239.6E-17170IPR017392AP2/ERF transcription factor ERF/PTI6
SMARTSM003801.1E-172370IPR001471AP2/ERF domain
PfamPF008479.7E-102370IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-242370IPR001471AP2/ERF domain
PROSITE profilePS5103219.6512370IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-172370IPR016177DNA-binding domain
CDDcd000185.77E-222470No hitNo description
PRINTSPR003675.3E-82435IPR001471AP2/ERF domain
PRINTSPR003675.3E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
MQYTTNSSKS SSSSTTGPGR HPTYRGVRRR SNGKWVSEIR EPKKPNRIWL GTFLTPEMAA  60
VAYDVAALAL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011468492.11e-44PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR02e-26ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A3S8T9063e-43A0A3S8T906_FRAAN; Transcription factor ERF15
STRINGXP_004305361.11e-38(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-19ERF family protein