PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00003347_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 132aa    MW: 14623.9 Da    PI: 10.4742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00003347_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.6e-1787130249
                               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 
                                        ++GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a
  FANhyb_icon00003347_a.1.g00001.1  87 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVA 130
                                       59****998.**********843...6******************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.8E-1187130IPR001471AP2/ERF domain
SMARTSM003804.8E-1887132IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1687131IPR016177DNA-binding domain
PROSITE profilePS5103219.54687132IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-2487131IPR001471AP2/ERF domain
PRINTSPR003672.5E-108899IPR001471AP2/ERF domain
CDDcd000187.05E-2488130No hitNo description
PRINTSPR003672.5E-10110126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MAKKINIESD PHGNLHTSSS SSSSTSVVTT TTSHDSVIDK RTESDQNSEK LSSSTGQEDN  60
NGSNNEPNTK KRQRSSNDHG DGGKHPTFRG VRMRSWGKWV SEIREPRKKS RIWLGTYPTA  120
EMAARAHDVA TR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004307005.11e-91PREDICTED: ethylene-responsive transcription factor ERF034-like
TrEMBLA0A3Q8TBF33e-90A0A3Q8TBF3_FRAAN; Transcription factor ERF21
STRINGXP_004307005.15e-91(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.19e-31ERF family protein