PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00001572_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | WRKY | ||||||||
Protein Properties | Length: 162aa MW: 18157.9 Da PI: 6.1421 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 50.8 | 3.4e-16 | 1 | 36 | 23 | 58 |
EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 sYYrCt ++C++kk+vers+edp++++itYeg H h FANhyb_icon00001572_a.1.g00001.1 1 SYYRCTNPRCSAKKQVERSSEDPDTLIITYEGLHLH 36 8*********************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-13 | 1 | 36 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.66E-12 | 1 | 36 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.089 | 1 | 39 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.8E-11 | 1 | 36 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.4E-7 | 1 | 38 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
SYYRCTNPRC SAKKQVERSS EDPDTLIITY EGLHLHFAYP FFHLTQAQNP NPPTKKPKKK 60 TSPAQPEDHH EQVAQESSRS LTPDPETDLH PSGTYADQPP QEFVEEERGS QGLLEDVVPF 120 MIRKPSSASS NSSCCSYRSP PTSPSSYSWP SYFDVGINHS IG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004302766.1 | 1e-114 | PREDICTED: probable WRKY transcription factor 49 | ||||
TrEMBL | A0A2P6R9Y3 | 2e-64 | A0A2P6R9Y3_ROSCH; Putative transcription factor WRKY family | ||||
STRING | XP_004302766.1 | 1e-114 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7118 | 34 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 6e-18 | WRKY DNA-binding protein 49 |