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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Eucgr.L03490.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
GRAS |
Protein Properties |
Length: 497aa MW: 54722.6 Da PI: 6.0282 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.L03490.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 349.8 | 4.2e-107 | 109 | 488 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar....svselykalppsetseknsseelaalklfse 86
lv+lL+++Aea++ ++ la+ +L rl+el+sp++ ++m+RlaayfteAL+ l + ++++l + p +++++++++++laa++l ++
Eucgr.L03490.1.p 109 LVHLLMAAAEALTGVNKCheLARVILVRLKELVSPTDgTNMERLAAYFTEALQGLLEGagggHGKHLISGGPQRDDHHHHQTDVLAAFQLMQD 201
68***********9665444************9987769*****************983223456677777888888888************* PP
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvp 175
+sP++kf+h+taNqaIleav +++rvHi+D+di++G+QW++L+qaL sR++gpp +lRiT++++ +g s +++e+g+rL+ fA+++g p
Eucgr.L03490.1.p 202 MSPYVKFGHFTANQAILEAVTQHRRVHIVDYDIMEGIQWASLMQALVSRKNGPPapHLRITALSRGGNGrrSIGTIQEMGRRLTAFATSIGQP 294
**************************************************887666*********888898999******************* PP
GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysal 267
f+f+ ++ +++++++L++ +gEal+ n++l+l ++ + ++ ++L+ k+l+P++v++ve+e+ +++ F+ rf+++l++ysal
Eucgr.L03490.1.p 295 FSFHQCRLDSDKTFRPSSLKLVRGEALIFNCMLHLPHFSYRAPES---VASFLSGAKTLNPRLVTLVEEELGPiGDQGFVSRFIDSLHHYSAL 384
*****99999***************************98555444...459*******************8888******************* PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslv 359
+dslea++p + ++r+ vEr++lg++iv + + e+ ++Wrerl++ GF+pv +s + +qaklll ++ dgyrvee s+ lv
Eucgr.L03490.1.p 385 YDSLEAGFPMQRRARALVERVFLGPRIVGSLGRIYRT--RGDEEGGSWRERLGATGFRPVDISFANHCQAKLLLGLFN-DGYRVEELaSNRLV 474
******************************9999887..456678*********************************.******8769999* PP
GRAS 360 lgWkdrpLvsvSaW 373
lgWk+r+L+s+S W
Eucgr.L03490.1.p 475 LGWKSRRLLSASIW 488
************** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 497 aa
Download sequence Send
to blast |
MAMAIDDAAE LDFSAYSTST TTTTSATTTT TDDEYGCNWN DWSPVVDWNT LSGGQDDFQD 60 LIESMIDESG LQPALSAVNY QEGCNSPSTD TTMFTDEEPS GDDLKGLRLV HLLMAAAEAL 120 TGVNKCHELA RVILVRLKEL VSPTDGTNME RLAAYFTEAL QGLLEGAGGG HGKHLISGGP 180 QRDDHHHHQT DVLAAFQLMQ DMSPYVKFGH FTANQAILEA VTQHRRVHIV DYDIMEGIQW 240 ASLMQALVSR KNGPPAPHLR ITALSRGGNG RRSIGTIQEM GRRLTAFATS IGQPFSFHQC 300 RLDSDKTFRP SSLKLVRGEA LIFNCMLHLP HFSYRAPESV ASFLSGAKTL NPRLVTLVEE 360 ELGPIGDQGF VSRFIDSLHH YSALYDSLEA GFPMQRRARA LVERVFLGPR IVGSLGRIYR 420 TRGDEEGGSW RERLGATGFR PVDISFANHC QAKLLLGLFN DGYRVEELAS NRLVLGWKSR 480 RLLSASIWSS PFDSDS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |