PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02466.1.p
Common NameEUGRSUZ_K02466
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 90aa    MW: 10405.8 Da    PI: 5.1372
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02466.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.5e-0714551454
                      HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                      d+i + +++L+ +lP+   + +++K+  +e+L++++ YI+sL
  Eucgr.K02466.1.p 14 DEIHDLIFKLQAMLPQlEQRRNDGKVAPSEVLKETCSYIRSL 55
                      67999***********888*********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-71473IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-71470IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-51455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MSTRRSRTSQ FTDDEIHDLI FKLQAMLPQL EQRRNDGKVA PSEVLKETCS YIRSLHREMD  60
ELSERLTTLL DNMEISSVDA QLLRNVLLQ*
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. May have a regulatory role in various aspects of gibberellin-dependent growth and development. {ECO:0000269|PubMed:16527868}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02466.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020586720.18e-26transcription factor ILI3-like
SwissprotQ9LJX16e-23PRE5_ARATH; Transcription factor PRE5
TrEMBLA0A059A6572e-57A0A059A657_EUCGR; Uncharacterized protein
STRINGEOY217916e-25(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25928225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-25bHLH family protein