PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02632.1.p
Common NameEUGRSUZ_I02632, LOC104419889
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family CAMTA
Protein Properties Length: 994aa    MW: 110113 Da    PI: 7.8481
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02632.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.92.5e-55201363118
              CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 
                       +e  +rwl+++ei++iL n++k++lt e+++rp+ gsl+L++rk +ryfrkDG+ w+kk+dgktv+E+hekLK g+v+vl+cyYah+een++f
  Eucgr.I02632.1.p  20 QEaGHRWLRPTEICEILRNYQKFNLTPEPPSRPPAGSLFLFDRKALRYFRKDGHRWRKKRDGKTVKEAHEKLKAGSVDVLHCYYAHGEENENF 112
                       44489**************************************************************************************** PP

              CG-1  95 qrrcywlLeeelekivlvhylevk 118
                       qrr+yw+L+++le+ivlvhy+evk
  Eucgr.I02632.1.p 113 QRRSYWMLDSQLEHIVLVHYREVK 136
                       *********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.99215141IPR005559CG-1 DNA-binding domain
SMARTSM010769.1E-7918136IPR005559CG-1 DNA-binding domain
PfamPF038591.5E-4922134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.4E-5436525IPR013783Immunoglobulin-like fold
PfamPF018334.6E-6437523IPR002909IPT domain
CDDcd001020.00101437525No hitNo description
SuperFamilySSF812961.2E-16438524IPR014756Immunoglobulin E-set
SuperFamilySSF484032.95E-19615731IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.204.4E-19618731IPR020683Ankyrin repeat-containing domain
PfamPF127967.9E-8618696IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029720.659619730IPR020683Ankyrin repeat-containing domain
CDDcd002044.74E-18619728No hitNo description
SMARTSM00248280636665IPR002110Ankyrin repeat
SMARTSM002480.0013669698IPR002110Ankyrin repeat
PROSITE profilePS5008811.354669701IPR002110Ankyrin repeat
SMARTSM00248530708737IPR002110Ankyrin repeat
SMARTSM00015140782806IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.04E-8819886IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.007836858IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.608837866IPR000048IQ motif, EF-hand binding site
PfamPF006124.2E-4838857IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0027859881IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.036860888IPR000048IQ motif, EF-hand binding site
PfamPF006125.8E-4863881IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.632942970IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 994 aa     Download sequence    Send to blast
MAECRRYLPA LHSDLQQILQ EAGHRWLRPT EICEILRNYQ KFNLTPEPPS RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKRD GKTVKEAHEK LKAGSVDVLH CYYAHGEENE NFQRRSYWML  120
DSQLEHIVLV HYREVKEGYK SGISHLLGDQ GPQIISSQAS SAGCFALANS HASTAQTSYV  180
LRVDGVDRSE QTISSDLENV DSLGGLGASL TKSAYCSAPY DAYKFSGDPA GLPASSTYQT  240
SSWSSGGTYN FNTRVPILAK ISCRNVDPSC NQEYQVDNKF PVKQPVTDFV AQRPTESKLD  300
PDSGVPDTTS GSRLHGVSEL QDVAVTSQCQ VAAENHSVAV KPQNTSTSTA HIGSSSNGGV  360
MNNEEAGELR KLDSFGRWMD KEIGQDCDES LMASDSGNYW NALPSESDDK EVSSLSRHLQ  420
LDTDSLGPSL SQEQLFSISD YSPDWAYSGI ETKVLVVGTF LGSKKLSADT KWGCMFGEIE  480
VSAEILTDTS MRCVAPAHAP GRVPFYVTCR NRLACSEVRE FEYREMPSVP SNIAPEDEVS  540
LQSQLAKLLY LDPVVPQLDC SVEVFDKCKL KNFTSSMNMT GKFDIGRVEE ASASTMSGCP  600
YARDAAIQCL LEDKLSQWLV HKLHEGGRGP NILDTQGQGV IHLAAALGYE RAMSNIIAAG  660
VSPNFRDAHG RTALHWAAYF GREETVIALV RLGAALGVVD DPRAACPGGQ TAADLASSRG  720
HKGIAAYLAE ADLTSRVSSL TVNKKIDTLV AEKAIEDAIA VVSTAAKDEE RCMKDSLAAV  780
RKSTHAAALI QAFFQTRSFQ QRQLTKGNSA ASQVSADLIA IGSFDKVKSL SHYEDYLHSA  840
ATKIQKKYRG WRGRKDFLKI RNRIVKVQAH VRGHQVRKQY KKVVRTVSIM EKAILRWRRK  900
RTGLRSFQLE RRVGDDHGGD EGTDDEYDFL RISRKQKFDE VERALARVKS MVRNPEARDQ  960
YMRLVQKFDN FKIINKGSCE SHVDAKQCRT DGE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02632.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010030018.10.0PREDICTED: calmodulin-binding transcription activator 3 isoform X1
TrEMBLA0A059ASQ30.0A0A059ASQ3_EUCGR; Uncharacterized protein
STRINGXP_010030018.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16526911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-145signal responsive 1